YRC Public Data Repository - Protein Structure Prediction

Protein:	TIM17
Organism:	Saccharomyces cerevisiae
Length:	158 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM17.

Description	E-value	Query Range	Subject Range
TIMM17B - translocase of inner mitochondrial membrane 17 homolog B (yeast) gi\|55662945 - gi\|55662945\|ref\|XP_521050.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	4.0E-47	[4..155]	[3..155]
TI17B_MOUSE - Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus GN=Timm17b PE=1 SV=1	3.0E-46	[4..154]	[3..154]
gi\|151944984 - gi\|151944984\|gb\|EDN63239.1\| translocase of the inner membrane [Saccharomyces cerevisiae YJM789] TIM17 - Essential subunit of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); with Tim23... gi\|190409364 - gi\|190409364\|gb\|EDV12629.1\| mitochondrial import inner membrane translocase subunit TIM17 [Saccharom... gi\|207344108 - gi\|207344108\|gb\|EDZ71355.1\| YJL143Wp-like protein [Saccharomyces cerevisiae AWRI1631] TIM17_YEAST - Mitochondrial import inner membrane translocase subunit TIM17 OS=Saccharomyces cerevisiae (strain AT...	5.0E-46	[1..158]	[1..158]
TI17A_RAT - Mitochondrial import inner membrane translocase subunit Tim17-A OS=Rattus norvegicus GN=Timm17a PE=2...	1.0E-43	[4..155]	[3..155]
gi\|18446934 - gi\|18446934\|gb\|AAL68059.1\| AT13347p [Drosophila melanogaster]	5.0E-41	[4..146]	[3..147]
CE16966 - status:Confirmed UniProt:O44477 protein_id:AAB92039.1	6.0E-41	[4..154]	[3..155]

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Predicted Domain #1

Region A:
Residues: [1-158]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADHSRDPC PIVILNDFGG AFAMGAIGGV VWHGIKGFRN SPLGERGSGA MSAIKARAPV  60
   61 LGGNFGVWGG LFSTFDCAVK AVRKREDPWN AIIAGFFTGG ALAVRGGWRH TRNSSITCAC 120
  121 LLGVIEGVGL MFQRYAAWQA KPMAPPLPEA PSSQPLQA

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	81.721246
Match:	PF02466
Description:	Tim17/Tim22/Tim23 family

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits