| Protein: | TRL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 827 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..827] | [1..827] |
|
|
0.0 | [40..805] | [26..761] |
|
|
0.0 | [6..809] | [3..798] |
|
|
2.0E-81 | [9..299] | [411..677] |
|
Region A: Residues: [1-307] |
1 11 21 31 41 51
| | | | | |
1 MPSPYDGKRT VTQLVNELEK AEKLSGRGRA YRRVCDLSHS NKKVISWKFN EWDYGKNTIT 60
61 LPCNARGLFI SDDTTNPVIV ARGYDKFFNV GEVNFTKWNW IEENCTGPYD VTIKANGCII 120
121 FISGLEDGTL VVCSKHSTGP RADVDRNHAE AGEKQLLRQL AAMNINRSDF ARMLYTHNVT 180
181 AVAEYCDDSF EEHILEYPLE KAGLYLHGVN VNKAEFETWD MKDVSQMASK YGFRCVQCIT 240
241 SNTLEDLKKF LDNCSATGSF EGQEIEGFVI RCHLKSTEKP FFFKYKFEEP YLMYRQWREV 300
301 TKDYISN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [308-827] |
1 11 21 31 41 51
| | | | | |
1 KSRVFKFRKH KFITNKYLDF AIPILESSPK ICENYLKGFG VIELRNKFLQ SYGMSGLEIL 60
61 NHEKVAELEL KNAIDYDKVD ERTKFLIFPI SVIGCGKTTT SQTLVNLFPD SWGHIQNDDI 120
121 TGKDKSQLMK KSLELLSKKE IKCVIVDRNN HQFRERKQLF EWLNELKEDY LVYDTNIKVI 180
181 GVSFAPYDKL SEIRDITLQR VIKRGNNHQS IKWDELGEKK VVGIMNGFLK RYQPVNLDKS 240
241 PDNMFDLMIE LDFGQADSSL TNAKQILNEI HKAYPILVPE IPKDDEIETA FRRSLDYKPT 300
301 VRKIVGKGNN NQQKTPKLIK PTYISAKIEN YDEIIELVKR CIASDAELTE KFKHLLASGK 360
361 VQKELHITLG HVMSSREKEA KKLWKSYCNR YTDQITEYNN NRIENAQGSG NNQNTQVKTT 420
421 DKLNFRLEKL CWDEKIIAIV VELSKDKDGC IIDENNEKIK GLCCQNKIPH ITLCKLESGV 480
481 KAVYSNVLCE KVESAEVDEN IKVVKLDNSK EFVGSVYLNF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
