| Protein: | EXO70 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 623 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXO70.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..622] | [4..628] |
|
|
0.0 | [6..623] | [4..617] |
|
|
0.0 | [1..623] | [1..623] |
|
|
0.0 | [10..622] | [14..639] |
|
Region A: Residues: [1-216] |
1 11 21 31 41 51
| | | | | |
1 MPAEIDIDEA DVLVLSQELQ KTSKLTFEIN KSLKKIAATS NQSSQLFTPI LARNNVLTTL 60
61 QRNIESTLNS VASVKDLANE ASKYEIILQK GINQVGLKQY TQVVHKLDDM LEDIQSGQAN 120
121 REENSEFHGI LTHLEQLIKR SEAQLRVYFI SILNSIKPFD PQINITKKMP FPYYEDQQLG 180
181 ALSWILDYFH GNSEGSIIQD ILVGERSKLI LKCMAF
|
| Detection Method: |  |
| Confidence: | 8.48 |
| Match: | 1hciA |
| Description: | alpha-actinin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [217-533] |
1 11 21 31 41 51
| | | | | |
1 LEPFAKEIST AKNAPYEKGS SGMNSYTEAL LGFIANEKSL VDDLYSQYTE SKPHVLSQIL 60
61 SPLISAYAKL FGANLKIVRS NLENFGFFSF ELVESINDVK KSLRGKELQN YNLLQDCTQE 120
121 VRQVTQSLFR DAIDRIIKKA NSISTIPSNN GVTEATVDTM SRLRKFSEYK NGCLGAMDNI 180
181 TRENWLPSNY KEKEYTLQNE ALNWEDHNVL LSCFISDCID TLAVNLERKA QIALMPNQEP 240
241 DVANPNSSKN KHKQRIGFFI LMNLTLVEQI VEKSELNLML AGEGHSRLER LKKRYISYMV 300
301 SDWRDLTANL MDSVFID
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [534-623] |
1 11 21 31 41 51
| | | | | |
1 SSGKKSKDKE QIKEKFRKFN EGFEDLVSKT KQYKLSDPSL KVTLKSEIIS LVMPMYERFY 60
61 SRYKDSFKNP RKHIKYTPDE LTTVLNQLVR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.793 | a.7.1 | Spectrin repeat |
| View | Download | 0.684 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.673 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.748 | a.112.1 | Description not found. |
| View | Download | 0.685 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.647 | a.7.1 | Spectrin repeat |
| View | Download | 0.637 | a.25.1 | Ferritin-like |
| View | Download | 0.622 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.615 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.607 | a.30.1 | ROP protein |
| View | Download | 0.604 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.587 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.576 | a.7.1 | Spectrin repeat |
| View | Download | 0.571 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.565 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.558 | a.24.1 | Apolipoprotein |
| View | Download | 0.549 | a.7.1 | Spectrin repeat |
| View | Download | 0.532 | a.7.1 | Spectrin repeat |
| View | Download | 0.521 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.515 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.514 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.514 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.513 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.507 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.501 | a.7.1 | Spectrin repeat |
| View | Download | 0.487 | a.7.8 | GAT domain |
| View | Download | 0.485 | a.7.7 | BAG domain |
| View | Download | 0.480 | a.2.7 | tRNA-binding arm |
| View | Download | 0.479 | a.30.1 | ROP protein |
| View | Download | 0.463 | a.47.2 | t-snare proteins |
| View | Download | 0.457 | a.22.1 | Histone-fold |
| View | Download | 0.451 | a.19.1 | Fertilization protein |
| View | Download | 0.448 | d.197.1 | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| View | Download | 0.445 | a.22.1 | Histone-fold |
| View | Download | 0.445 | a.7.7 | BAG domain |
| View | Download | 0.441 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.440 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.437 | a.47.2 | t-snare proteins |
| View | Download | 0.436 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.434 | a.47.2 | t-snare proteins |
| View | Download | 0.428 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.422 | a.25.1 | Ferritin-like |
| View | Download | 0.415 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.414 | a.2.7 | tRNA-binding arm |
| View | Download | 0.414 | a.47.2 | t-snare proteins |
| View | Download | 0.411 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.409 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.406 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.405 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.402 | a.2.7 | tRNA-binding arm |
| View | Download | 0.397 | a.63.1 | Apolipophorin-III |
| View | Download | 0.395 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.393 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.390 | a.47.2 | t-snare proteins |
| View | Download | 0.390 | a.47.2 | t-snare proteins |
| View | Download | 0.386 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.384 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.382 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.377 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.376 | a.126.1 | Serum albumin-like |
| View | Download | 0.373 | a.21.1 | HMG-box |
| View | Download | 0.373 | a.22.1 | Histone-fold |
| View | Download | 0.372 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.367 | a.47.2 | t-snare proteins |
| View | Download | 0.367 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.365 | a.22.1 | Histone-fold |
| View | Download | 0.364 | a.74.1 | Cyclin-like |
| View | Download | 0.363 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.359 | a.47.2 | t-snare proteins |
| View | Download | 0.352 | a.1.1 | Globin-like |
| View | Download | 0.351 | a.30.1 | ROP protein |
| View | Download | 0.349 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.348 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.347 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.346 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.346 | a.7.7 | BAG domain |
| View | Download | 0.344 | f.16.1 | Gated mechanosensitive channel |
| View | Download | 0.341 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.340 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.340 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.338 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.336 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.335 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.332 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.328 | a.47.2 | t-snare proteins |
| View | Download | 0.327 | a.112.1 | Description not found. |
| View | Download | 0.324 | a.7.8 | GAT domain |
| View | Download | 0.322 | a.4.1 | Homeodomain-like |
| View | Download | 0.321 | a.30.1 | ROP protein |
| View | Download | 0.317 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.316 | d.110.4 | SNARE-like |
| View | Download | 0.311 | a.112.1 | Description not found. |
| View | Download | 0.310 | a.47.2 | t-snare proteins |
| View | Download | 0.307 | a.112.1 | Description not found. |
| View | Download | 0.303 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.300 | a.7.8 | GAT domain |
| View | Download | 0.297 | a.123.1 | Nuclear receptor ligand-binding domain |
| View | Download | 0.295 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.293 | a.74.1 | Cyclin-like |
| View | Download | 0.292 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.292 | a.158.1 | F-box domain |
| View | Download | 0.289 | a.7.1 | Spectrin repeat |
| View | Download | 0.289 | a.7.1 | Spectrin repeat |
| View | Download | 0.289 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.287 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.285 | a.7.8 | GAT domain |
| View | Download | 0.285 | a.47.2 | t-snare proteins |
| View | Download | 0.284 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.283 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.281 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.281 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.280 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.277 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.276 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.276 | a.7.7 | BAG domain |
| View | Download | 0.275 | a.2.3 | Chaperone J-domain |
| View | Download | 0.275 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.273 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.273 | a.77.1 | DEATH domain |
| View | Download | 0.269 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.267 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.263 | a.30.1 | ROP protein |
| View | Download | 0.263 | a.47.2 | t-snare proteins |
| View | Download | 0.263 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.262 | d.197.1 | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| View | Download | 0.262 | d.58.48 | MTH1187-like |
| View | Download | 0.262 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.261 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.257 | a.19.1 | Fertilization protein |
| View | Download | 0.256 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.255 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.254 | a.74.1 | Cyclin-like |
| View | Download | 0.254 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.253 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.252 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.250 | a.22.1 | Histone-fold |
| View | Download | 0.250 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.249 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.247 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.247 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.246 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.246 | a.24.1 | Apolipoprotein |
| View | Download | 0.246 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.245 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.245 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.243 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.242 | a.4.1 | Homeodomain-like |
| View | Download | 0.242 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.241 | a.22.1 | Histone-fold |
| View | Download | 0.241 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.239 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.236 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.236 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.236 | a.7.7 | BAG domain |
| View | Download | 0.235 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.234 | a.21.1 | HMG-box |
| View | Download | 0.233 | a.2.7 | tRNA-binding arm |
| View | Download | 0.233 | a.74.1 | Cyclin-like |
| View | Download | 0.231 | a.77.1 | DEATH domain |
| View | Download | 0.231 | a.3.1 | Cytochrome c |
| View | Download | 0.230 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.230 | a.19.1 | Fertilization protein |
| View | Download | 0.229 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.228 | a.2.7 | tRNA-binding arm |
| View | Download | 0.228 | a.47.2 | t-snare proteins |
| View | Download | 0.225 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.225 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.225 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.225 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.224 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.223 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.222 | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.222 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.222 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.220 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.220 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.220 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.219 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.219 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.218 | a.22.1 | Histone-fold |
| View | Download | 0.217 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.217 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.216 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.215 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.215 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.214 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.214 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.213 | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.213 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.212 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.211 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.210 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.210 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.209 | a.24.3 | Cytochromes |
| View | Download | 0.209 | a.22.1 | Histone-fold |
| View | Download | 0.209 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.206 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.205 | a.77.1 | DEATH domain |
| View | Download | 0.205 | a.7.8 | GAT domain |
| View | Download | 0.204 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.204 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.203 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.203 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.201 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.201 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.200 | f.16.1 | Gated mechanosensitive channel |
