| Protein: | TAX4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 604 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAX4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..604] | [1..604] |
|
|
0.0 | [84..560] | [858..1331] |
|
|
3.0E-35 | [466..599] | [215..357] |
|
|
3.0E-34 | [466..602] | [218..352] |
|
Region A: Residues: [1-433] |
1 11 21 31 41 51
| | | | | |
1 MHFPKKKHSG NLSVVELPKE ALQDSLTAAQ ITFKRYAHPN GNAGSAERPR HLKVESAPVV 60
61 KSEPSLPRMR QPEPRSINHQ YSRETLPGHS EAFSVPTTPL QTIHYDVRNK ASNSPSSIAA 120
121 AETAAYLAHT NSFSNRSSGV GSRDPVMDTE TKPPRAPSAL KNELQLNRMR IPPPSYDNNV 180
181 RSRSISPQVS YSTSLSSSCS ISSDGEETSY REKSTDEAFP PEPSMSSYSL ASKASAKASL 240
241 TDPSQRQQES DYTAMNKLNG GNIIYKGTLP DLIPRSQRKT SKPRFKHRLL RSPEQQQENL 300
301 SRVYSDQTQN GRAIINTQQN VKLKTTMRRG KYAITDNDET FPYDRKSVSS DSDTDEDSNV 360
361 MEIKDKKKKS RRSKIKKGLK TTAAVVGSST SVLPFPHHHH HHHQLHNPNS HHLHTHHHTS 420
421 SHKFNEDKPW KSH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [434-604] |
1 11 21 31 41 51
| | | | | |
1 RDLGFITEQE RKRYESMWVS NRYSYLRLLP WWPSLANEDD ESHLQPLNLP QDGLMLNLVV 60
61 KDIWYRSNLP RDLLVQIYNM VDTRKDGTLD RKSFIVGMWL VDQCLYGRKL TNELDQRVWN 120
121 SVDGYVLGTI NVKPATSDHY HNANNPLDKP SKLSVRQELK NIKRDLRNVR I
|
| Detection Method: | |
| Confidence: | 56.274545 |
| Match: | 1c07A_ |
| Description: | Eps15 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.53567454488695 | bayes_pls_golite062009 |
| protein binding | 1.16246005294206 | bayes_pls_golite062009 |
| ion binding | 0.748522810620974 | bayes_pls_golite062009 |
| cation binding | 0.747391827600734 | bayes_pls_golite062009 |
| metal ion binding | 0.747391827600734 | bayes_pls_golite062009 |
