| Protein: | LAS21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 830 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAS21.
| Description | E-value | Query Range |
Subject Range |
|
|
537.0 | [0..7] | [829..10] |
|
|
534.0 | [0..7] | [829..10] |
|
|
520.0 | [0..9] | [822..15] |
|
|
481.0 | [0..8] | [789..3] |
|
|
477.0 | [0..8] | [789..3] |
|
|
472.0 | [0..1] | [828..1] |
|
|
466.0 | [0..6] | [816..10] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MNLKQFTCLS CAQLLAILLF IFAFFPRKIV LTGISKQDPD QDRDLQRDRP FQKLVFVIID 60
61 ALRSDFLFDS QISHFNNVHQ WLNTGEAWGY TSFANPPTVT LPRLKSITTG STPSFIDLLL 120
121 NVAQDIDSND LSEHDSWLQQ FIQHNNTIRF MGDDTWLKLF PQQWFDFADP THSFFVSDFT 180
181 QVDNNVTRNL PGKLFQEWAQ WDVAILHYLG LDHIGHKDGP HSKFMAAKHQ EMDSILKSIY 240
241 DEVLEHEDDD DTLICVLGDH GMNELGNHGG SSAGETSAGL LFLSPKLAQF ARPESQVNYT 300
301 LPINASPDWN FQYLETVQQI DIVPTIAALF GMPIPMNSVG IIIPDFLQLL PNKLASMKEN 360
361 FMHLWKLSDH HGEVALDD
|
| Detection Method: |  |
| Confidence: | 34.522879 |
| Match: | 1e3cP |
| Description: | Arylsulfatase A |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [379-508] |
1 11 21 31 41 51
| | | | | |
1 FTAEDIYTKM YTIQETLTKS ATNYNYPLLT LAFVGFLIIT IIAIYVLLRY SGPDFWQLRV 60
61 SSLSVLLVSI ILGVSTFASS FIEEEHQLWW WIVTAFSAVP LFVYRLNVLI IVRWFIMMAC 120
121 VRSIKFWNNS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.994 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [509-704] |
1 11 21 31 41 51
| | | | | |
1 GQKFIYSNVM SNLLNQNPSW KWCLNMLTFL VLIMASAGFQ VLHFIVTTIL VGLCFTYKIS 60
61 WEIVNGNQAE IPLFMHDLLA KIDFAPTESN LIVLARVFFQ AWAIVVISRL VLTKLKVLNK 120
121 NYLIKDMKVY ITILLMFQTS SQNIGQFLVF QILESQIFYF FQNIPTASLT STSKIYFSNL 180
181 VSLILQNFTF FQFGGT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [705-830] |
1 11 21 31 41 51
| | | | | |
1 NSISTIDLGN AYHGVSSDYN IYVVGILMSV ANFAPAIYWS MLPWSINYAS IPAQVKLQTF 60
61 IRSKLPAFTY HCIFGTCLMT ACVVLRFHLF IWSVFSPKLC YFLGWNFVMG LLNGWLPELA 120
121 LLCALD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.915 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
