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View Structure Prediction Details

Protein: YJL043W
Organism: Saccharomyces cerevisiae
Length: 257 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJL043W.

Description E-value Query
Range
Subject
Range
gi|51012779 - gi|51012779|gb|AAT92683.1| YJL043W [Saccharomyces cerevisiae]
533.0 [0..1] [257..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVDYSGLER YTDINASFGK LVNTYCCFQR CEAISEQLEI LKSLVPKCHD IVALTDEDFA  60
   61 SGRTAGLTQK LFAMAMTLHQ ITDCIDLLQK CNTIIPIEIA NPASFESGAA TAPLRQSYAR 120
  121 LLDDWSHYMG PSTV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHTGCTNRPK WRFPWQQSRT IIIPMLFIGE TAMSTRDLRS VLHDCEIRHA SEMPLQLLWT  60
   61 SSPELVYATP HVDDYDIWSR YGSDYNMQIE DEDEASKGRQ RKCVVQLEAL LGALPTTDPL 120
  121 FQW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle