| Protein: | MHP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1398 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MHP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1398] | [1..1398] |
|
|
0.0 | [291..1052] | [2..838] |
|
|
1.0E-57 | [13..634] | [1229..1860] |
|
|
5.0E-52 | [1..484] | [545..1025] |
|
Region A: Residues: [1-677] |
1 11 21 31 41 51
| | | | | |
1 MDSKDTQKLL KEHRIPCIDV GWLVRPSAST SKSSRPGKSE SKANSVAPDI QMDTARPPVF 60
61 ETSVDSSSSI LSSNDKGRRH SVAASLLMDN QRANAGSTSV PTNIPPPRGR SKSVVETNLS 120
121 NVEADSGHHH HHRHHHHTED APAPKKVGFF KSLFGHRKKD QEQQEKERER KERSPSPTHV 180
181 DRGAAIRRER TATISAESPP PLQYNAPPSY NDTVVPLTRS KTESEVYYEN HPQSYYHGRM 240
241 RTYHSPEEGK VDGTSPADDH NYGGSRPDPR LMDFLRYYKS KDYKLAAFKE GNFIKSSASP 300
301 TTKKNRRASF SLHNDKPQPA KSLAHQKFDA KGRPIPPHPD APKLPSAFRK KHPSNASIVD 360
361 TVDSNSDVSS SAQNNNQTPS SHKFGAFLRK VTSYGNNNNN STNASSLSAN VNNPDTSSTS 420
421 LWSSSSMEFD PSKITTVPGL ENIRPLKHVS FATNTYFNDP PQQICSKNPR KGEVEVKPNG 480
481 SVVIHRLTPQ ERKKIMESTS LGVVVGGTGQ LKLLNPEEDD ANAKSKEEMA PQKQNEVEAH 540
541 DEEDNNSQRR NIVMAAAEAA AEARAKEAPN ELKRIVTNNE EEVTVSKTAS HLTIDKPMIS 600
601 RRGASTSSLA SMVSSDTNGT NADDEGEILP PPSLKIPHDI VYTRCCHLRE ILPIPATLKQ 660
661 LKKGSTDPIP ILQLRNP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [678-998] |
1 11 21 31 41 51
| | | | | |
1 RPSMVEIWSF SDFLSIAPVL CLSLDGVQLT VQMLRIILSS LVYKQHFQKL SLRNTPLDEE 60
61 GWKVLCYFVS KAKSLHSIDL TMVPSIKTNV QKPSKSSLKS KILRMQCNLE NRSDMNWDLL 120
121 TASIALMGGL EEIVISGAKM NSAQFKNFIL VACIATERLG LAYNGLSKSQ CDDLAKWMVQ 180
181 SKVTGLDVGF NDLNGKLSSF TDAVLGKIQK ANEKNVFKFL SLNGTNLRVN EHDTFENNEV 240
241 LKLISVLCYL ENLKFLDISN NPAIFPHCVP TLIDFLPVFV NLVRLHIDYN NLSSTSVVML 300
301 AEILPMCSRL NYFSMLGTEL D
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [999-1398] |
1 11 21 31 41 51
| | | | | |
1 LASSKALAEA VRKSSSLMTL DVDYVYMPEN IKEKISLYAL RNIQGELKRV NSDDKDIKDS 60
61 QFSSLQDQLS LLLTEKADNS EHYNKMVENF MAKIALARIK ISKVVHDLFD LKLNGQLNLE 120
121 GKEALIRLCF IEASLERGCD LLKQRHNNTL KSPEAVSKSR KGGNQAQPNS ESCQRMLLSS 180
181 SILQNSDHIA LMPFGSAIVE KSSPDAEDAV EFREGDDSNV NHEDVPANDQ QFRDEVDIKN 240
241 KYSIIKRELE HEKLVGGGDL PVDKEILNRA AQSLDSDQIK EFLLKNDVST ILGVIDELHS 300
301 QGYHLHHIFK KQGNQEETAF RTKDEQQSSQ SNDSSANASP TTDPISTGSN TSRTNDNAHI 360
361 PPTDAPGFDK FMNNAEENAI DAAYDDVLDK IQDARNSSTK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [414-1185] |
1 11 21 31 41 51
| | | | | |
1 PDTSSTSLWS SSSMEFDPSK ITTVPGLENI RPLKHVSFAT NTYFNDPPQQ ICSKNPRKGE 60
61 VEVKPNGSVV IHRLTPQERK KIMESTSLGV VVGGTGQLKL LNPEEDDANA KSKEEMAPQK 120
121 QNEVEAHDEE DNNSQRRNIV MAAAEAAAEA RAKEAPNELK RIVTNNEEEV TVSKTASHLT 180
181 IDKPMISRRG ASTSSLASMV SSDTNGTNAD DEGEILPPPS LKIPHDIVYT RCCHLREILP 240
241 IPATLKQLKK GSTDPIPILQ LRNPRPSMVE IWSFSDFLSI APVLCLSLDG VQLTVQMLRI 300
301 ILSSLVYKQH FQKLSLRNTP LDEEGWKVLC YFVSKAKSLH SIDLTMVPSI KTNVQKPSKS 360
361 SLKSKILRMQ CNLENRSDMN WDLLTASIAL MGGLEEIVIS GAKMNSAQFK NFILVACIAT 420
421 ERLGLAYNGL SKSQCDDLAK WMVQSKVTGL DVGFNDLNGK LSSFTDAVLG KIQKANEKNV 480
481 FKFLSLNGTN LRVNEHDTFE NNEVLKLISV LCYLENLKFL DISNNPAIFP HCVPTLIDFL 540
541 PVFVNLVRLH IDYNNLSSTS VVMLAEILPM CSRLNYFSML GTELDLASSK ALAEAVRKSS 600
601 SLMTLDVDYV YMPENIKEKI SLYALRNIQG ELKRVNSDDK DIKDSQFSSL QDQLSLLLTE 660
661 KADNSEHYNK MVENFMAKIA LARIKISKVV HDLFDLKLNG QLNLEGKEAL IRLCFIEASL 720
721 ERGCDLLKQR HNNTLKSPEA VSKSRKGGNQ AQPNSESCQR MLLSSSILQN SD
|
| Detection Method: | |
| Confidence: | 2.41 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1186-1398] |
1 11 21 31 41 51
| | | | | |
1 HIALMPFGSA IVEKSSPDAE DAVEFREGDD SNVNHEDVPA NDQQFRDEVD IKNKYSIIKR 60
61 ELEHEKLVGG GDLPVDKEIL NRAAQSLDSD QIKEFLLKND VSTILGVIDE LHSQGYHLHH 120
121 IFKKQGNQEE TAFRTKDEQQ SSQSNDSSAN ASPTTDPIST GSNTSRTNDN AHIPPTDAPG 180
181 FDKFMNNAEE NAIDAAYDDV LDKIQDARNS STK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
