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View Structure Prediction Details

Protein: RRN7
Organism: Saccharomyces cerevisiae
Length: 514 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRN7.

Description E-value Query
Range
Subject
Range
RRN7_YEAST - RNA polymerase I-specific transcription initiation factor RRN7 OS=Saccharomyces cerevisiae (strain A...
gi|190409472 - gi|190409472|gb|EDV12737.1| yeast Pol I core factor also composed of Rrn11p [Saccharomyces cerevisia...
RRN7 - Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcriptio...
0.0 [1..514] [1..514]
RRN7_SCHPO - RNA polymerase I-specific transcription initiation factor rrn7 OS=Schizosaccharomyces pombe (strain ...
rrn7 - RNA polymerase I transcription factor subunit Rrn7
0.006 [4..137] [5..116]

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Predicted Domain #1
Region A:
Residues: [1-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFIRGPIC GTDNCPSRLW RIIDGRRTCQ YGHVMEGDVE FNDDEDDLNG LGAGVITRRL  60
   61 NLTTNATGSF QSSQLTNSQL LQQQQRQSHK KFKKLIGHEA KLLFLKSFQF ILKRQIRWLI 120
  121 TEMRFPKEFE HVAKIIWLKI LKTINDQPQE ELKLQLHMTS TISILYLAST HLSLPVYTCD 180
  181 YIKWICTAKM PYFQASEILP KSWRIQLPNY YVSILEGSIS PFNGQLYNKI ALTCGMIHFK 240
  241 EFFNSEISCQ GLLLKLVMQC ALPPEFYFYT KQVIEFEETD IRNLTLWERT DERHTGRVSN 300
  301 HAELRVLSYF MLTINWMLSF DRDRQYPLKW ILSLTESLTQ RTTTSESIGR NIVKVVYPDK 360
  361 PTSSDYFQWS EEETLEFLKW MEKQFLPTQT KSLHNENGSM EMTIDQKIAR RKLYKIFPLD 420
  421 REANHDGEFN DSTHQLTFIE DLQERYAKQT PFFESNKIRD SLNYQEANPP ARKEAIGRLL 480
  481 THIASQLLVD FAISKEQLKD CISRIKNACL HRMN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle