| Protein: | MAD3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 515 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAD3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..515] | [1..515] |
|
|
0.0 | [25..479] | [14..503] |
|
|
0.0 | [24..469] | [20..502] |
|
|
0.0 | [24..469] | [20..502] |
|
Region A: Residues: [1-265] |
1 11 21 31 41 51
| | | | | |
1 MKAYAKKRIS YMPSSPSQNV INFEEIETQK ENILPLKEGR SAAALSKAIH QPLVEINQVK 60
61 SSFEQRLIDE LPALSDPITL YLEYIKWLNN AYPQGGNSKQ SGMLTLLERC LSHLKDLERY 120
121 RNDVRFLKIW FWYIELFTRN SFMESRDIFM YMLRNGIGSE LASFYEEFTN LLIQKEKFQY 180
181 AVKILQLGIK NKARPNKVLE DRLNHLLREL GENNIQLGNE ISMDSLESTV LGKTRSEFVN 240
241 RLELANQNGT SSDVNLTKNN VFVDG
|
| Detection Method: |  |
| Confidence: | 7.6 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [266-389] |
1 11 21 31 41 51
| | | | | |
1 EESDVELFET PNRGVYRDGW ENFDLKAERN KENNLRISLL EANTNLGELK QHEMLSQKKR 60
61 PYDEKLPIFR DSIGRSDPVY QMINTKDQKP EKIDCNFKLI YCEDEESKGG RLEFSLEEVL 120
121 AISR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [390-515] |
1 11 21 31 41 51
| | | | | |
1 NVYKRVRTNR KHPREANLGQ EESANQKEAE AQSKRPKISR KALVSKSLTP SNQGRMFSGE 60
61 EYINCPMTPK GRSTETSDII SAVKPRQLTP ILEMRESNSF SQSKNSEIIS DDDKSSSSFI 120
121 SYPPQR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
