YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YIR044C
Organism: Saccharomyces cerevisiae
Length: 61 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIR044C.

Description E-value Query
Range
Subject
Range
COS7 - Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-enc...
COS7_YEAST - Protein COS7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COS7 PE=1 SV=1
104.0 [0..1] [61..1]

Back

Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKENEVKDEK SVDVLSFKQL ESQKTVLPQD VFRNELTWFC YEIYKSLAFR IWMLLWLPLS  60
   61 I

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.391 a.60.2 RuvA domain 2-like
View Download 0.282 a.60.2 RuvA domain 2-like
View Download 0.270 a.16.1 S15/NS1 RNA-binding domain
View Download 0.257 a.118.1 ARM repeat
View Download 0.248 a.4.5 "Winged helix" DNA-binding domain
View Download 0.248 a.4.5 "Winged helix" DNA-binding domain
View Download 0.235 a.4.5 "Winged helix" DNA-binding domain
View Download 0.219 a.65.1 Annexin
View Download 0.205 a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle