| Protein: | SQT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 431 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SQT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [10..431] | [878..1250] |
|
|
0.0 | [7..429] | [1066..1481] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MEPQEEFITT EEVEQEIVPT VEVEQDVPVD IEGENDDDDE MMNDDEEALE VDMSNNSLTY 60
61 FDKHTDSVFA IGHHPNLPLV CTGGGDNLAH LWTSHSQ
|
| Detection Method: |  |
| Confidence: | 24.69897 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3.73992288706975 | bayes_pls_golite062009 | |
| structural molecule activity | 3.73518050245315 | bayes_pls_golite062009 |
| snoRNA binding | 2.69983094099712 | bayes_pls_golite062009 |
| RNA binding | 2.3514111482663 | bayes_pls_golite062009 |
| binding | 2.2778252170547 | bayes_pls_golite062009 |
| protein binding | 1.42618832381942 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.722742354759599 | bayes_pls_golite062009 |
| actin binding | 0.00606924241186668 | bayes_pls_golite062009 |
|
Region A: Residues: [98-431] |
1 11 21 31 41 51
| | | | | |
1 PPKFAGTLTG YGESVISCSF TSEGGFLVTA DMSGKVLVHM GQKGGAQWKL ASQMQEVEEI 60
61 VWLKTHPTIA RTFAFGATDG SVWCYQINEQ DGSLEQLMSG FVHQQDCSMG EFINTDKGEN 120
121 TLELVTCSLD STIVAWNCFT GQQLFKITQA EIKGLEAPWI SLSLAPETLT KGNSGVVACG 180
181 SNNGLLAVIN CNNGGAILHL STVIELKPEQ DELDASIESI SWSSKFSLMA IGLVCGEILL 240
241 YDTSAWRVRH KFVLEDSVTK LMFDNDDLFA SCINGKVYQF NARTGQEKFV CVGHNMGVLD 300
301 FILLHPVANT GTEQKRKVIT AGDEGVSLVF EVPN
|
| Detection Method: | |
| Confidence: | 73.221849 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
