Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIR007W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..764] | [1..764] |
|
|
8.0E-87 | [12..285] | [40..262] |
|
|
2.0E-64 | [8..269] | [39..228] |
|
|
1.0E-57 | [12..269] | [45..237] |
|
|
6.0E-4 | [74..133] | [77..135] |
|
|
0.001 | [2..133] | [28..150] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MPAKIHISAD GQFCDKDGNE IQLRGVNLDP SVKIPAKPFL STHAPIENDT FFEDADKVSF 60
61 INHPLVLDD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.390 | a.3.1 | Cytochrome c |
| View | Download | 0.395 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.326 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.353 | a.2.3 | Chaperone J-domain |
| View | Download | 0.380 | d.121.1 | DNA topoisomerase I domain |
| View | Download | 0.321 | a.4.1 | Homeodomain-like |
| View | Download | 0.307 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.276 | a.20.1 | PGBD-like |
|
Region A: Residues: [70-167] |
1 11 21 31 41 51
| | | | | |
1 IEQHIIRLKS LGYNTIRLPF TWESLEHAGP GQYDFDYMDY IVEVLTRINS VQQGMYIYLD 60
61 PHQDVWSRFS GGSGAPLWTL YCAGFQPANF LATDAAIL
|
| Detection Method: | |
| Confidence: | 2.30103 |
| Match: | 1edg__ |
| Description: | Endoglucanase CelA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-764] |
1 11 21 31 41 51
| | | | | |
1 HNYYIDPKTG REVGKDEESY PKMVWPTNYF KLACQTMFTL FFGGKQYAPK CTINGENIQD 60
61 YLQGRFNDAI MTLCARIKEK APELFESNCI IGLESMNEPN CGYIGETNLD VIPKERNLKL 120
121 GKTPTAFQSF MLGEGIECTI DQYKRTFFGF SKGKPCTINP KGKKAWLSAE ERDAIDAKYN 180
181 WERNPEWKPD TCIWKLHGVW EIQNGKRPVL LKPNYFSQPD ATVFINNHFV DYYTGIYNKF 240
241 REFDQELFII IQPPVMKPPP NLQNSKILDN RTICACHFYD GMTLMYKTWN KRIGIDTYGL 300
301 VNKKYSNPAF AVVLGENNIR KCIRKQLSEM QKDAKSMLGK KVPVFFTEIG IPFDMDDKKA 360
361 YITNDYSSQT AALDALGFAL EGSNLSYTLW CYCSINSHIW GDNWNNEDFS IWSPDDKPLY 420
421 HDTRAKTPTP EPSPASTVAS VSTSTSKSGS SQPPSFIKPD NHLDLDSPSC TLKSDLSGFR 480
481 ALDAIMRPFP IQIHGRFEFA EFNLCNKSYL LKLVGKTTPE QITVPTYIFI PRHHFTPSRL 540
541 SIRSSSGHYT YNTDYQVLEW FHEPGHQFIE ICAKSKSRPN TPGSDTSNDL PAECVIS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
