| Protein: | YIL177C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1758 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIL177C.
| Description | E-value | Query Range |
Subject Range |
|
|
2554.0 | [0..1] | [1758..1] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MKVSDRRKFE KANFDEFESA LNNKNDLVHC PSITLFESIP TEVRSFYEDE KSGLIKVVKF 60
61 RTGAMDRKRS FEKVVISVMV GKNVKKFLTF VEDEPDFQGG PIPSKYLIPK KINLMVYTLF 120
121 QVHTLKFNRK DYDTLSLFYL NRGYYNELSF RVLERCHEIA SARPNDSSTM RTFTDFVSGA 180
181 PIVRSLQKST IRKYGYNLAP YMFLLLHVDE LSIFSAYQAS LPGEKKVDTE RLKRDLCP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [239-449] |
1 11 21 31 41 51
| | | | | |
1 RKPIEIKYFS QICNDMMNKK DRLGDILHII LRACALNFGA GPRGGAGDEE DRSITNEEPI 60
61 IPSVDEHGLK VCKLRSPNTP RRLRKTLDAV KALLVSSCAC TARDLDIFDD NNGVAMWKWI 120
121 KILYHEVAQE TTLKDSYRIT LVPSSDGISL LAFAGPQRNV YVDDTTRRIQ LYTDYNKNGS 180
181 SEPRLKTLDG LTSDYVFYFV TVLRQMQICA L
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [450-557] |
1 11 21 31 41 51
| | | | | |
1 GNSYDAFNHD PWMDVVGFED PNQVTNRDIS RIVLYSYMFL NTAKGCLVEY ATFRQYMREL 60
61 PKNAPQKLNF REMRQGLIAL GRHCVGSRFE TDLYESATSE LMANHSVQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.924 | a.118.1 | ARM repeat |
| View | Download | 0.845 | a.1.1 | Globin-like |
| View | Download | 0.845 | a.1.1 | Globin-like |
| View | Download | 0.839 | a.118.1 | ARM repeat |
| View | Download | 0.768 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.757 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.741 | a.1.1 | Globin-like |
| View | Download | 0.651 | a.74.1 | Cyclin-like |
|
Region A: Residues: [558-1103] |
1 11 21 31 41 51
| | | | | |
1 TGRNIYGVDS FSLTSVSGTT ATLLQERASE RWIQWLGLES DYHCSFSSTR NAEDVVAGEA 60
61 ASSNHHQKIS RVTRKRPREP KSTNDILVAG QKLFGSSFEF RDLHQLRLCY EIYMADTPSV 120
121 AVQAPPGYGK TELFHLPLIA LASKGDVEYV SFLFVPYTVL LANCMIRLGR CGCLNVAPVR 180
181 NFIEEGYDGV TDLYVGIYDD LASTNFTDRI AAWENIVECT FRTNNVKLGY LIVDEFHNFE 240
241 TEVYRQSQFG GITNLDFDAF EKAIFLSGTA PEAVADAALQ RIGLTGLAKK SMDINELKRS 300
301 EDLSRGLSSY PTRMFNLIKE KSEVPLGHVH KIRKKVESQP EEALKLLLAL FESEPESKAI 360
361 VVASTTNEVE ELACSWRKYF RVVWIHGKLG AAEKVSRTKE FVTDGSMQVL IGTKLVTEGI 420
421 DIKQLMMVIM LDNRLNIIEL IQGVGRLRDG GLCYLLSRKN SWAARNRKGE LPPIKEGCIT 480
481 EQVREFYGLE SKKGKKGQHV GCCGSRTDLS ADTVELIERM DRLAEKQATA SMSIVALPSS 540
541 FQESNS
|
| Detection Method: | |
| Confidence: | 158.228787 |
| Match: | 1fuuA |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1104-1464] |
1 11 21 31 41 51
| | | | | |
1 SDRYRKYCSS DEDSNTCIHG SANASTNAST NAITTASTNV RTNATTNAST NATTNASTNA 60
61 STNATTNAST NATTNSSTNA TTTASTNVRT SATTTASINV RTSATTTEST NSSTNATTTE 120
121 STNSSTNATT TESTNSNTSA TTTASINVRT SATTTESTNS STSATTTASI NVRTSATTTK 180
181 SINSSTNATT TESTNSNTNA TTTESTNSST NATTTESTNS STNATTTEST NSNTSAATTE 240
241 STNSNTSATT TESTNASAKE DANKDGNAED NRFHPVTDIN KESYKRKGSQ MVLLERKKLK 300
301 AQFPNTSENM NVLQFLGFRS DEIKHLFLYG IDIYFCPEGV FTQYGLCKGC QKMFELCVCW 360
361 A
|
| Detection Method: | |
| Confidence: | 13.62 |
| Match: | |
| Description: | No description for 1m2vB was found. |
|
Region A: Residues: [1465-1758] |
1 11 21 31 41 51
| | | | | |
1 GQKVSYRRIA WEALAVERML RNDEEYKEYL EDIEPYHGDP VGYLKYFSVK RREIYSQIQR 60
61 NYAWYLAITR RRETISVLDS TRGKQGSQVF RMSGRQIKEL YFKVWSNLRE SKTEVLQYFL 120
121 NWDEKKCQEE WEAKDDTVVV EALEKGGVFQ RLRSMTSAGL QGPQYVKLQF SRHHRQLRSR 180
181 YELSLGMHLR DQIALGVTPS KVPHWTAFLS MLIGLFYNKT FRQKLEYLLE QISEVWLLPH 240
241 WLDLANVEVL AADDTRVPLY MLMVAVHKEL DSDDVPDGRF DILLCRDSSR EVGE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
