| Protein: | VTH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1549 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VTH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1549] | [1..1549] |
|
|
0.0 | [7..1417] | [14..1406] |
|
|
0.0 | [717..1357] | [193..795] |
|
|
0.0 | [717..1357] | [193..794] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MALFRALYII WVFLLIPLSN AEEFTPKVTR TLSRYVFDIV NFDDSNTLIR AEEDSVEISF 60
61 DAGENWKTID EIEEPIESFV VDPFRGHDRA FAFVKTAPKF YVTDDQGKSW RPLTIPISEK 120
121 ASNYFCDVTT HPIKKKHLII RCDLLTIKNS GLMYVGREIY TTNDGVSFSQ VKPSFGKIDG 180
181 HI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [183-536] |
1 11 21 31 41 51
| | | | | |
1 STARCDFIKS SEDSDLGGND ASILCLFRNT EYIESTGSTI DKSELILSAD GGETFKELVQ 60
61 FKDKVVSRYE ILKHHVIVLT QDDMYNEMSS TNIWISNDVS TFQVARTPTK IRHVNMGQIH 120
121 EDSIGRIVLP VSRERDDEDS NQPGAAEVLI SDSEGLKFLP INWIPNNQFG YINVAYPGFL 180
181 KGTFFGSFHP FIEYSDRKRK YSRQKVREET KVSVDNGLTW TNLKVVDREN VDLFGCDVTK 240
241 PERCSLQTHF YDLRNLNPSA GIMMISGIVG DGSAYNWKEE KTFISRDSGL TWRLVHNSTG 300
301 LYTTGDLGNI IMYIPYRSNE NGDVPSKFYY SLDQGKTWGE YDLIMPIYPY RLVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [537-722] |
1 11 21 31 41 51
| | | | | |
1 TISDGSGSKF ILTGTSITED PIFITYSIDF SAVFDYKSCE EGDFEDWNLA DGKCVNGAKY 60
61 KYRRRKQDAQ CLVKKAFKDL SLDETPCNSC TGSDYECSFE FVRDAKGDCI PDYNLIALSD 120
121 ICDKSKGKSV LVKPLQLIKG DKCKTPMKIE SVDIPCDEIP KEGSSDKEIV TTENKFDFEI 180
181 KFYQYF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [723-1398] |
1 11 21 31 41 51
| | | | | |
1 DTVADESLVM LNSIGDAYIS HDGGQTIKRF DTDGEKIVEI VFNPYFNSSA YLFGSKGNIF 60
61 LTHDRGYSFM IAKLPEARQL GMPLDFSAKA QDTFIYYGGK NCESILSPEC HAVAYLTKDG 120
121 GETFTEMLDN AIHCEFAGTL FKYPSNDDMV MCQVKEKFSQ TRSLVSSTDF FQDDRKTVFE 180
181 NIIGYLSTGG YIIVAVPHED NELRAYVTND GAEFTEAKFP YDEDIGKQDA FTILGSEEGS 240
241 IFLHLATNLE SGHDFGNLLK SNSNGTSFVT LEHAVNRNTF GYVDFEKVQG LEGIIITNIV 300
301 SNSEKVGENK EDEQLKTKIT FNDGSDWNFL KPPKKDSEGK KFPCDSVSLD KCSLHLHGYT 360
361 ERKDIRDTYS SGSALGMMFG VGNVGDRLLP YEECSTFLTT DGGETWTEVK KGPHQWEYGD 420
421 HGGVLVLVPE NAETDSISYS TDFGKTWKDY KFCGDKVLVK DIITVPRDSA LRFLLFGEAK 480
481 NMGSGSFRTY TIDFRNIFER QCEFDITGRK RADFKYSPLG SRTGCLFGHK TEFLRKTDEK 540
541 CFIGNIPLSE FSRNVKNCPC TRQDFECDYN FYKASDGTCK LVKGLSSANG ADICKKEPDL 600
601 IEYYDSSGYR KIPLSTCKGG LKLDAHLAPH PCPGKEKAFR EKYSINTGAY ALVFVTILLV 660
661 IFFVAWFVYD RGIRRN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1399-1549] |
1 11 21 31 41 51
| | | | | |
1 GGFSRFEEIR LGDDGLIENN RTDRVVNIIV RLGLCISLIT KSAFQRAKAG TAQLSSKFRA 60
61 RFGNKKGATY SSLLHDQLSD EPDGFHEDSN DLSSFRGQGS NSEIEQEDVD TSQQEHTLRT 120
121 DLLGASNIPD ALPARSASHE SDLAAARSED K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1290-1357] |
1 11 21 31 41 51
| | | | | |
1 DYNFYKASDG TCKLVKGLSS ANGADICKKE PDLIEYYDSS GYRKIPLSTC KGGLKLDAHL 60
61 APHPCPGK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1358-1549] |
1 11 21 31 41 51
| | | | | |
1 EKAFREKYSI NTGAYALVFV TILLVIFFVA WFVYDRGIRR NGGFSRFEEI RLGDDGLIEN 60
61 NRTDRVVNII VRLGLCISLI TKSAFQRAKA GTAQLSSKFR ARFGNKKGAT YSSLLHDQLS 120
121 DEPDGFHEDS NDLSSFRGQG SNSEIEQEDV DTSQQEHTLR TDLLGASNIP DALPARSASH 180
181 ESDLAAARSE DK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
