| Protein: | GUT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 649 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUT2.
| Description | E-value | Query Range |
Subject Range |
|
|
539.0 | [0..24] | [649..24] |
|
|
515.0 | [0..7] | [644..12] |
|
|
514.0 | [0..7] | [644..11] |
|
|
507.0 | [0..7] | [644..11] |
|
|
501.0 | [0..7] | [644..11] |
|
|
500.0 | [0..7] | [644..11] |
|
Region A: Residues: [1-497] |
1 11 21 31 41 51
| | | | | |
1 MFSVTRRRAA GAAAAMATAT GTLYWMTSQG DRPLVHNDPS YMVQFPTAAP PQVSRRDLLD 60
61 RLAKTHQFDV LIIGGGATGT GCALDAATRG LNVALVEKGD FASGTSSKST KMIHGGVRYL 120
121 EKAFWEFSKA QLDLVIEALN ERKHLINTAP HLCTVLPILI PIYSTWQVPY IYMGCKFYDF 180
181 FAGSQNLKKS YLLSKSATVE KAPMLTTDNL KASLVYHDGS FNDSRLNATL AITAVENGAT 240
241 VLNYVEVQKL IKDPTSGKVI GAEARDVETN ELVRINAKCV VNATGPYSDA ILQMDRNPSG 300
301 LPDSPLNDNS KIKSTFNQIA VMDPKMVIPS IGVHIVLPSF YCPKDMGLLD VRTSDGRVMF 360
361 FLPWQGKVLA GTTDIPLKQV PENPMPTEAD IQDILKELQH YIEFPVKRED VLSAWAGVRP 420
421 LVRDPRTIPA DGKKGSATQG VVRSHFLFTS DNGLITIAGG KWTTYRQMAE ETVDKVVEVG 480
481 GFHNLKPCHT RDIKLAG
|
| Detection Method: |  |
| Confidence: | 40.69897 |
| Match: | 1el5A |
| Description: | Sarcosine oxidase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [498-570] |
1 11 21 31 41 51
| | | | | |
1 AEEWTQNYVA LLAQNYHLSS KMSNYLVQNY GTRSSIICEF FKESMENKLP LSLADKENNV 60
61 IYSSEENNLV NFD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.660 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.660 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.635 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.604 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.579 | a.77.1 | DEATH domain |
| View | Download | 0.579 | a.77.1 | DEATH domain |
| View | Download | 0.542 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.532 | d.374.1 | Description not found. |
| View | Download | 0.519 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.500 | a.60.2 | RuvA domain 2-like |
|
Region A: Residues: [571-649] |
1 11 21 31 41 51
| | | | | |
1 TFRYPFTIGE LKYSMQYEYC RTPLDFLLRR TRFAFLDAKE ALNAVHATVK VMGDEFNWSE 60
61 KKRQWELEKT VNFIKTFGV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.935 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.869 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.837 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.829 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.829 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.823 | N/A | N/A | a.23.7 | Description not found. |
| View | Download | 0.779 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.695 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.686 | N/A | N/A | a.46.1 | Methionine synthase domain |
