YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MCM10
Organism: Saccharomyces cerevisiae
Length: 571 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCM10.

Description E-value Query
Range
Subject
Range
MCM10 - Essential chromatin-associated protein involved in the initiation of DNA replication; required for t...
gi|151943016 - gi|151943016|gb|EDN61351.1| minichromosome maintenance-related protein [Saccharomyces cerevisiae YJM...
MCM10_YEAST - Minichromosome maintenance protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MC...
0.0 [1..571] [1..571]
gi|33383235, gi|... - gi|55958695|emb|CAI16558.1| minichromosome maintenance complex component 10 [Homo sapiens], gi|55957...
0.0 [20..561] [109..592]
MCM10_XENLA - Protein MCM10 homolog OS=Xenopus laevis GN=mcm10 PE=1 SV=2
0.0 [19..566] [97..585]
cdc23 - MCM-associated protein Mcm10
MCM10_SCHPO - DNA replication licensing factor mcm10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mcm...
6.0E-98 [22..355] [8..344]
CE24338 - status:Partially_confirmed UniProt:Q9U2C2 protein_id:CAB57900.1
9.0E-84 [24..356] [5..313]

Back

Predicted Domain #1
Region A:
Residues: [1-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDPREILAV DPYNNITSDE EDEQAIAREL EFMERKRQAL VERLKRKQEF KKPQDPNFEA  60
   61 IEVPQSPTKN RVKVGSHNAT QQGTKFEGSN INEVRLSQLQ QQPKPPASTT TYFMEKFQNA 120
  121 KKNEDKQIAK FESMMNARVH TFSTDEKKYV PIITNELESF SNLWVKKRYI PEDDLKRALH 180
  181 EIKILRLGKL FAKIRPPKFQ EPEYANWATV GLISHKSDIK FTSSEKPVKF FMFTITDFQH 240
  241 TLDVYIFGKK GVERYYNLRL GDVIAILNPE VLPWRPSGRG NFIKSFNLRI SHDFKCILEI 300
  301 GSSRDLGWCP IVNKKTHKKC GSPINISLHK CCDYHREVQF RGTSAKRIEL NGGYALGAPT 360
  361 KVDS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [365-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPSLYKAKGE NGFNIIKGTR KRLSEEEERL KKSSHNFTNS NSAKAFFDEK FQNPDMLANL  60
   61 DNKRRKIIET KKSTALSREL GKIMRRRESS GLEDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [460-571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVGERQKMKR TTESALQTGL IQRLGFDPTH GKISQVLKSS VSGSEPKNNL LGKKKTVIND  60
   61 LLHYKKEKVI LAPSKNEWFK KRSHREEVWQ KHFGSKETKE TSDGSASDLE II

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [487-571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTHGKISQVL KSSVSGSEPK NNLLGKKKTV INDLLHYKKE KVILAPSKNE WFKKRSHREE  60
   61 VWQKHFGSKE TKETSDGSAS DLEII

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle