Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMA108.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [4..943] | [72..963] |
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0.0 | [4..943] | [70..963] |
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0.0 | [4..943] | [69..962] |
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0.0 | [4..942] | [68..959] |
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0.0 | [4..943] | [72..962] |
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0.0 | [4..943] | [80..970] |
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Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MSDNLLSLEN PVVPSHYELR LEIDPKQSSP NFKGSAIIHL KFNPNSTTLA SIEDSFTQFK 60
61 LHSKDLIVLS AHATIGSTKF DLKISQDTGK HLSIFNSESP IQLSNDCPLI LSVQYVGKIR 120
121 DIKTHHDKTF GIFKTNFMDR KTGTANNHVV ATHCQPFSAS NIFPCIDEPS NKSTFQLNIA 180
181 TDAQYKAVSN TPVEMVEALD SSQKHLVKFA KTPLMTTSVF GFSIGDL
|
| Detection Method: |  |
| Confidence: | 169.9691 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [228-328] |
1 11 21 31 41 51
| | | | | |
1 EFLKTEIKLE GDRTIPVSIY APWDIANAAF TLDTVQKYLP LLESYFKCPY PLPKLDFVLL 60
61 PYLSDMAMEN FGMITIQLNH LLIPPNALAN ETVREQAQQL I
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| Detection Method: | |
| Confidence: | 169.9691 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [329-522] |
1 11 21 31 41 51
| | | | | |
1 VHELVHQWMG NYISFDSWES LWFNESFATW LACHILEQNG DLSHYWTSEP YLLQQVEPTM 60
61 CRDAADVNGR SIFQIAQRNT GIDSQTSDIF DPEAYTKGII MLRSLQLATG ESHLQKGLES 120
121 VFEDTKTFHA RSVKPMDIWN HIGKFLKSQN ITNFVSSWTR TPGLPVVKVE VEEKDGKTQT 180
181 KLTQHRFINQ LSTE
|
| Detection Method: | |
| Confidence: | 169.9691 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [523-581] |
1 11 21 31 41 51
| | | | | |
1 EKDQLEDVPY QVPLFGVLPD GKMDTKNVLL TDRTLKFDYP ILVINHLAQG YYRVSYESE
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.644 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.641 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.749 | d.68.3 | SirA-like |
| View | Download | 0.661 | d.68.7 | R3H domain |
| View | Download | 0.821 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.636 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.610 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.601 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.596 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.550 | d.58.17 | Metal-binding domain |
| View | Download | 0.550 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.472 | a.4.1 | Homeodomain-like |
| View | Download | 0.460 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.458 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.449 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.444 | c.23.1 | CheY-like |
| View | Download | 0.439 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.438 | a.4.1 | Homeodomain-like |
| View | Download | 0.410 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.400 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.382 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.382 | a.4.1 | Homeodomain-like |
| View | Download | 0.355 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.335 | d.58.17 | Metal-binding domain |
| View | Download | 0.330 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.326 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.302 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.289 | g.7.1 | Snake toxin-like |
| View | Download | 0.276 | d.79.3 | L30e-like |
| View | Download | 0.264 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.257 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.254 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.243 | d.95.2 | Homing endonucleases |
| View | Download | 0.231 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.229 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.225 | a.139.1 | Type I dockerin domain |
| View | Download | 0.209 | a.4.5 | "Winged helix" DNA-binding domain |
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Region A: Residues: [582-839] |
1 11 21 31 41 51
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1 ECYALINDKI TEETLSEIDL RKIFLDLSQF IGDEGFQNSI HLHGLFKILN HIASPSTKIA 60
61 SKYWDPLSKG LEVLQTIDRA SLTSSKLQSF LKKKIVIPLF NKIDWPHGEF DKSTNPHELK 120
121 VMSQVLFLNK NSAKCAELCQ IYFKHLLQGP RSSVPLELVN SILVVVSQHC ANIKQWKKIF 180
181 DLVKRSSCTG ITNHVINMYD QNSSETAMLI QNGAIESLGF CLDSDIVKKT LNFITSNIES 240
241 EGMELALFGF NYNFKKRL
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [840-946] |
1 11 21 31 41 51
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1 NKNEKPQDQV VRETIWEWYM GNFDQWARKA TRKGTTTGDH LHKALRSISL IIFQMFVADE 60
61 PQKIEKFINL EKEKLGQSLL SLDDIWASVQ QDEESRKTIR RDLASLV
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.806 | 0.044 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.782 | 0.044 | cytoplasm | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.899 | 0.044 | cytoplasm | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.741 | 0.044 | cytoplasm | a.63.1 | Apolipophorin-III |
| View | Download | 0.740 | 0.044 | cytoplasm | a.112.1 | Description not found. |
| View | Download | 0.700 | 0.044 | cytoplasm | a.19.1 | Fertilization protein |
| View | Download | 0.665 | 0.044 | cytoplasm | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.656 | 0.044 | cytoplasm | a.46.1 | Methionine synthase domain |
| View | Download | 0.580 | 0.044 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.576 | 0.044 | cytoplasm | a.118.1 | ARM repeat |
| View | Download | 0.561 | 0.044 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.509 | 0.044 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.505 | 0.044 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.502 | 0.044 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.498 | 0.044 | cytoplasm | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.497 | 0.044 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.488 | 0.044 | cytoplasm | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.471 | 0.044 | cytoplasm | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.465 | 0.044 | cytoplasm | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.454 | 0.044 | cytoplasm | a.25.1 | Ferritin-like |
| View | Download | 0.452 | 0.044 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.443 | 0.044 | cytoplasm | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.442 | 0.044 | cytoplasm | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.439 | 0.044 | cytoplasm | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.434 | 0.044 | cytoplasm | a.24.3 | Cytochromes |
| View | Download | 0.429 | 0.044 | cytoplasm | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.414 | 0.044 | cytoplasm | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.413 | 0.044 | cytoplasm | a.64.1 | Saposin |
| View | Download | 0.412 | 0.044 | cytoplasm | a.4.12 | TrpR-like |
| View | Download | 0.405 | 0.044 | cytoplasm | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.393 | 0.044 | cytoplasm | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.379 | 0.044 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.376 | 0.044 | cytoplasm | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.367 | 0.044 | cytoplasm | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.355 | 0.044 | cytoplasm | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.351 | 0.044 | cytoplasm | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.346 | 0.044 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.344 | 0.044 | cytoplasm | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.339 | 0.044 | cytoplasm | a.118.8 | TPR-like |
| View | Download | 0.337 | 0.044 | cytoplasm | a.59.1 | PAH2 domain |
| View | Download | 0.333 | 0.044 | cytoplasm | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.319 | 0.044 | cytoplasm | a.4.12 | TrpR-like |
| View | Download | 0.318 | 0.044 | cytoplasm | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.315 | 0.044 | cytoplasm | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.308 | 0.044 | cytoplasm | a.24.3 | Cytochromes |
| View | Download | 0.304 | 0.044 | cytoplasm | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.301 | 0.044 | cytoplasm | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
| View | Download | 0.300 | 0.044 | cytoplasm | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.298 | 0.044 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.296 | 0.044 | cytoplasm | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.294 | 0.044 | cytoplasm | a.24.4 | Hemerythrin |
| View | Download | 0.289 | 0.044 | cytoplasm | a.26.1 | 4-helical cytokines |
| View | Download | 0.288 | 0.044 | cytoplasm | a.11.2 | Second domain of FERM |
| View | Download | 0.287 | 0.044 | cytoplasm | a.126.1 | Serum albumin-like |
| View | Download | 0.280 | 0.044 | cytoplasm | d.216.1 | Rotavirus NSP2 fragment, N-terminal domain |
| View | Download | 0.279 | 0.044 | cytoplasm | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.278 | 0.044 | cytoplasm | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.273 | 0.044 | cytoplasm | d.203.1 | DsrC, the gamma subunit of dissimilatory sulfite reductase |
| View | Download | 0.269 | 0.044 | cytoplasm | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.265 | 0.044 | cytoplasm | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.263 | 0.044 | cytoplasm | a.4.1 | Homeodomain-like |
| View | Download | 0.255 | 0.044 | cytoplasm | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.254 | 0.044 | cytoplasm | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.253 | 0.044 | cytoplasm | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.251 | 0.044 | cytoplasm | a.118.14 | FliG |
| View | Download | 0.251 | 0.044 | cytoplasm | a.74.1 | Cyclin-like |
| View | Download | 0.249 | 0.044 | cytoplasm | a.118.1 | ARM repeat |
| View | Download | 0.249 | 0.044 | cytoplasm | a.22.1 | Histone-fold |
| View | Download | 0.249 | 0.044 | cytoplasm | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.247 | 0.044 | cytoplasm | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.246 | 0.044 | cytoplasm | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.246 | 0.044 | cytoplasm | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.245 | 0.044 | cytoplasm | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.244 | 0.044 | cytoplasm | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.243 | 0.044 | cytoplasm | a.65.1 | Annexin |
| View | Download | 0.243 | 0.044 | cytoplasm | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.240 | 0.044 | cytoplasm | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.239 | 0.044 | cytoplasm | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.234 | 0.044 | cytoplasm | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.233 | 0.044 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.232 | 0.044 | cytoplasm | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.229 | 0.044 | cytoplasm | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.229 | 0.044 | cytoplasm | a.7.1 | Spectrin repeat |
| View | Download | 0.227 | 0.044 | cytoplasm | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.226 | 0.044 | cytoplasm | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.225 | 0.044 | cytoplasm | a.7.7 | BAG domain |
| View | Download | 0.220 | 0.044 | cytoplasm | a.4.1 | Homeodomain-like |
| View | Download | 0.216 | 0.044 | cytoplasm | d.79.1 | YjgF-like |
| View | Download | 0.209 | 0.044 | cytoplasm | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.207 | 0.044 | cytoplasm | c.47.1 | Thioredoxin-like |
| View | Download | 0.207 | 0.044 | cytoplasm | a.182.1 | GatB/YqeY domain |
| View | Download | 0.204 | 0.044 | cytoplasm | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.203 | 0.044 | cytoplasm | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.201 | 0.044 | cytoplasm | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
