| Protein: | QDR2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 542 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QDR2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-81 | [41..460] | [12..446] |
|
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2.0E-80 | [7..536] | [47..543] |
|
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1.0E-79 | [12..542] | [124..619] |
|
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1.0E-78 | [54..470] | [6..439] |
|
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2.0E-78 | [54..470] | [6..439] |
|
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5.0E-78 | [31..461] | [18..463] |
|
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2.0E-77 | [62..465] | [13..433] |
|
Region A: Residues: [1-469] |
1 11 21 31 41 51
| | | | | |
1 MAGATSSIIR ENDFEDELAE SMQSYNRETA DKLALTRTES VKPEPEITAP PHSRFSRSFK 60
61 TVLIAQCAFT GFFSTIAGAI YYPVLSVIER KFDIDEELVN VTVVVYFVFQ GLAPTFMGGF 120
121 ADSLGRRPVV LVAIVIYFGA CIGLACAQTY AQIIVLRCLQ AAGISPVIAI NSGIMGDVTT 180
181 RAERGGYVGY VAGFQVLGSA FGALIGAGLS SRWGWRAIFW FLAIGSGICF LASFLILPET 240
241 KRNISGNGSV TPKSYLNRAP ILVLPTVRKS LHLDNPDYET LELPTQLNLL APFKILKAYE 300
301 ICILMLVAGL QFAMYTTHLT ALSTALSKQY HLTVAKVGLC YLPSGICTLC SIVIAGRYLN 360
361 WNYRRRLKYY QNWLGKKRSK LLEEHDNDLN LVQRIIENDP KYTFNIFKAR LQPAFVTLLL 420
421 SSSGFCAYGW CITVKAPLAA VLCMSGFASL FSNCILTFST TLIVDLFPT
|
| Detection Method: |  |
| Confidence: | 17.045757 |
| Match: | 1lviA_ |
| Description: | No description for 1lviA_ was found. |
|
Region A: Residues: [470-542] |
1 11 21 31 41 51
| | | | | |
1 KTSTATGCLN LFRCILSAVF IAALSKMVEK MKFGGVFTFL GALTSSSSIL LFILLRKGKE 60
61 LAFKRKKQEL GVN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.649 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.582 | a.64.1 | Saposin |
| View | Download | 0.667 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.625 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.799 | a.112.1 | Description not found. |
| View | Download | 0.580 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.571 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.513 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.510 | a.64.1 | Saposin |
| View | Download | 0.507 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.497 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.457 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.444 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.437 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.423 | a.77.1 | DEATH domain |
| View | Download | 0.416 | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.393 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.372 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.371 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.370 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.368 | a.64.1 | Saposin |
| View | Download | 0.365 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.362 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.350 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.344 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.339 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.337 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.332 | a.126.1 | Serum albumin-like |
| View | Download | 0.330 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.319 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.313 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.309 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.305 | a.39.1 | EF-hand |
| View | Download | 0.301 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.288 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.286 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.286 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.286 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.285 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.284 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.280 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.278 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.276 | a.30.1 | ROP protein |
| View | Download | 0.275 | a.22.1 | Histone-fold |
| View | Download | 0.274 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.273 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.271 | a.2.7 | tRNA-binding arm |
| View | Download | 0.260 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.259 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.257 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.254 | g.63.1 | Mollusk pheromone |
| View | Download | 0.247 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.246 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.243 | a.77.1 | DEATH domain |
| View | Download | 0.243 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.239 | a.39.1 | EF-hand |
| View | Download | 0.237 | a.3.1 | Cytochrome c |
| View | Download | 0.235 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.230 | a.4.1 | Homeodomain-like |
| View | Download | 0.229 | a.74.1 | Cyclin-like |
| View | Download | 0.229 | a.4.1 | Homeodomain-like |
| View | Download | 0.222 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.218 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.213 | a.5.2 | UBA-like |
