| Protein: | SGA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 549 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGA1.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..549] | [1..549] |
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0.0 | [26..509] | [294..777] |
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0.0 | [26..509] | [283..766] |
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0.0 | [56..546] | [1..456] |
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0.0 | [56..546] | [1..457] |
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0.0 | [56..546] | [1..456] |
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Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MARQKMFYNK LLGMLSVGFG FAWALENITI YEFDFGKGIL DQSYGGVFSN NGPSQVQLRD 60
61 AVLMNGTVVY D
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.402 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.502 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.488 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.621 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.456 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.392 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.391 | d.58.49 | YajQ-like |
| View | Download | 0.380 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.369 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.361 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.352 | d.58.17 | Metal-binding domain |
| View | Download | 0.337 | c.47.1 | Thioredoxin-like |
| View | Download | 0.326 | b.1.18 | E set domains |
| View | Download | 0.326 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.312 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.295 | c.47.1 | Thioredoxin-like |
| View | Download | 0.291 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.269 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.262 | d.58.49 | YajQ-like |
| View | Download | 0.248 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.244 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.242 | d.58.5 | GlnB-like |
| View | Download | 0.242 | b.1.1 | Immunoglobulin |
| View | Download | 0.239 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.235 | d.26.2 | Colicin E3 immunity protein |
| View | Download | 0.228 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.224 | a.4.5 | "Winged helix" DNA-binding domain |
| Term | Confidence | Notes |
| glucan 1,4-alpha-glucosidase activity | 5.15001795572345 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 4.93931890201451 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 4.50236427574756 | bayes_pls_golite062009 |
| hydrolase activity | 3.40551547894122 | bayes_pls_golite062009 |
| catalytic activity | 1.16285856935495 | bayes_pls_golite062009 |
| trehalase activity | 1.11894002588912 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.903455956749701 | bayes_pls_golite062009 |
| binding | 0.668943347886111 | bayes_pls_golite062009 |
| protein binding | 0.31260719357226 | bayes_pls_golite062009 |
| alpha,alpha-trehalase activity | 0.17719034423607 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity | 0.0683547784833305 | bayes_pls_golite062009 |
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Region A: Residues: [72-91] |
1 11 21 31 41 51
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1 SNGAWDSSAL EEWLQGQKKV
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Region B: Residues: [313-549] |
1 11 21 31 41 51
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1 VDPANGFING KYNYIVGTPM IADTLRSGLD ISTLLAANTV HDAPSASHLP FDINDPAVLN 60
61 TLHHLMLHMR SIYPINDSSK NATGIALGRY PEDVYDGYGF GEGNPWVLAT CTASTTLYQL 120
121 IYRHISEQHD LVVPMNNDCS NAFWSELVFS NLTTLGNDEG YLILEFNTPA FNQTIQKIFQ 180
181 LADSFLVKLK AHVGTDGELS EQFNKYTGFM QGAQHLTWSY TSFWDAYQIR QEVLQSL
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| Detection Method: | |
| Confidence: | 877.9897 |
| Match: | 1ayx__ |
| Description: | Glucoamylase |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [92-312] |
1 11 21 31 41 51
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1 SIEKIFENIG PSAVYPSISP GVVIASPSQT HPDYFYQWIR DSALTINSIV SHSAGPAIET 60
61 LLQYLNVSFH LQRSNNTLGA GIGYTNDTVA LGDPKWNVDN TAFTEDWGRP QNDGPALRSI 120
121 AILKIIDYIK QSGTDLGAKY PFQSTADIFD DIVRWDLRFI IDHWNSSGFD LWEEVNGMHF 180
181 FTLLVQLSAV DKSLSYFNAS ERSSPFVEEL RQTRRDISKF L
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| Detection Method: | |
| Confidence: | 877.9897 |
| Match: | 1ayx__ |
| Description: | Glucoamylase |
| Matching Structure (courtesy of the PDB): |
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