| Protein: | SYG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 902 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYG1.
| Description | E-value | Query Range |
Subject Range |
|
|
713.0 | [0..1] | [814..1] |
|
Region A: Residues: [1-434] |
1 11 21 31 41 51
| | | | | |
1 MKFADHLTES AIPEWRDKYI DYKVGKKKLR RYKEKLDAEE EQSSSYRSWM PSVSVYQTAF 60
61 QQREPGKSRS DGDYRSGPAF KKDYSALQRE FVADFIEDWL ISFQLSKCNE FYLWLLKECD 120
121 KKFEVLQSQL HYYSLQKNYE RDNLNRSSSN VDMSTSLYAA GLAGRSDSRV NSIDSDSRSV 180
181 MYGSMPCTKE AKKPRLSLLA YCQKVLKDNR LLPSWPKRGF SLLQDLRQDA SSRGRETFAF 240
241 GASFLETMTT TQARNLLSNA IIEYYLYLQL VKSFRDINVT GFRKMVKKFD KTCHTRELTT 300
301 FMSYARTHYT LFKHADANVQ LVAQKMQQIT SSQPTPTSEL SSAQRDKEPI TWLETQITEW 360
361 FTTALTNSPK DRKHNTHKLK KLTIQYSISE QMVHRNNRSI VQMLVVGLGI GVSMTLITYT 420
421 LYLGISSEET SFTH
|
| Detection Method: |  |
| Confidence: | 20.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [435-834] |
1 11 21 31 41 51
| | | | | |
1 KILFPLWGGW YMVLLIAFLF LVNCFIWHRT GINYRFIMLG EIQSKNGTQF FNNDFATSKI 60
61 PLKLYFLTFF IVPCAVCSML SFALEKLTPL GFLYIGIVSF LFLCPSGLIP YWDKVVHTRK 120
121 WLVVTLIRLM MSGFFPVEFG DFFLGDIICS LTYSIADIAM FFCVYSHTPN NLCGSSHSRA 180
181 MGVLSCLPSY WRFMQCLRRF ADSGDWFPHL LNAAKYTLGI AYNATLCAYR LSDRSEQRRT 240
241 PFIVCATLNS ILTSAWDLVM DWSFAHNTTS YNWLLRDDLY LAGKKNWENG SYSFSRKLVY 300
301 YFAMIWDILI RFEWIVYAIA PQTIQQSAVT SFILALLEVL RRFVWIIFRV ENEHVANVHL 360
361 FRVTGDAPLP YPIAQVGDDS MDSSDLGSKA FSSLNDIPIT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [835-902] |
1 11 21 31 41 51
| | | | | |
1 PSHDNNPHSF AEPMPAYRGT FRRRSSVFEN ISRSIPWAHA TDFQRPTVNT VDDRSPETDS 60
61 ESEVESIM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.510 | a.4.1 | Homeodomain-like |
| View | Download | 0.474 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.474 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.459 | a.189.1 | Description not found. |
| View | Download | 0.452 | a.4.1 | Homeodomain-like |
| View | Download | 0.438 | a.101.1 | Uteroglobin-like |
| View | Download | 0.343 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.327 | a.60.1 | SAM/Pointed domain |
