| Protein: | NOT3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 836 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOT3.
| Description | E-value | Query Range |
Subject Range |
|
|
506.0 | [0..1] | [836..1] |
|
|
328.0 | [0..4] | [785..14] |
|
|
313.0 | [0..4] | [785..5] |
|
|
313.0 | [0..4] | [785..5] |
|
|
308.0 | [0..4] | [785..5] |
|
|
303.0 | [0..4] | [785..5] |
|
|
286.0 | [0..4] | [785..5] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MAHRKLQQEV DRVFKKINEG LEIFNSYYER HESCTNNPSQ KDKLESDLKR EVKKLQRLRE 60
61 QIKSWQSSPD IKDKDSLLDY RRSVEIAMEK YKAVEKASKE KAYSNIS
|
| Detection Method: |  |
| Confidence: | 8.39794 |
| Match: | 1gk4A |
| Description: | Vimentin coil |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [108-258] |
1 11 21 31 41 51
| | | | | |
1 LKKSETLDPQ ERERRDISEY LSQMIDELER QYDSLQVEID KLLLLNKKKK TSSTTNDEKK 60
61 EQYKRFQARY RWHQQQMELA LRLLANEELD PQDVKNVQDD INYFVESNQD PDFVEDETIY 120
121 DGLNLQSNEA IAHEVAQYFA SQNAEDNNTS D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.950 | a.47.1 | STAT |
|
Region A: Residues: [259-372] |
1 11 21 31 41 51
| | | | | |
1 ANESLQDISK LSKKEQRKLE REAKKAAKLA AKNATGAAIP VAGPSSTPSP VIPVADASKE 60
61 TERSPSSSPI HNATKPEEAV KTSIKSPRSS ADNLLPSLQK SPSSATPETP TNVH
|
| Detection Method: | |
| Confidence: | 11.01 |
| Match: | |
| Description: | No description for 1deqA was found. |
|
Region A: Residues: [373-687] |
1 11 21 31 41 51
| | | | | |
1 THIHQTPNGI TGATTLKPAT LPAKPAGELK WAVAASQAVE KDRKVTSASS TISNTSTKTP 60
61 TTAAATTTSS NANSRIGSAL NTPKLSTSSL SLQPDNTGAS SSAATAAAVL AAGAAAVHQN 120
121 NQAFYRNMSS SHHPLVSLAT NPKSEHEVAT TVNQNGPENT TKKVMEQKEE ESPEERNKLQ 180
181 VPTFGVFDDD FESDRDSETE PEEEEQPSTP KYLSLEQREA KTNEIKKEFV SDFETLLLPS 240
241 GVQEFIMSSE LYNSQIESKI TYKRSRDMCE ISRLVEVPQG VNPPSPLDAF RSTQQWDVMR 300
301 CSLRDIIIGS ERLKE
|
| Detection Method: | |
| Confidence: | 10.54 |
| Match: | |
| Description: | No description for 1ei3A was found. |
|
Region A: Residues: [688-836] |
1 11 21 31 41 51
| | | | | |
1 DSSSIYAKIL ENFRTLEMFS LFYNYYFAIT PLEREIAYKI LNERDWKVSK DGTMWFLRQG 60
61 EVKFFNEICE VGDYKIFKLD DWTVIDKINF RLDYSFLQPP VDTASEVRDV SVDNNNVNDQ 120
121 SNVTLEQQKQ EISHGKQLLK QLKQGKISV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
