| Protein: | ULP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1034 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ULP2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1034] | [1..1034] |
|
|
0.0 | [271..661] | [207..583] |
|
|
1.0E-96 | [271..661] | [208..582] |
|
|
3.0E-92 | [271..661] | [208..582] |
|
|
5.0E-87 | [309..697] | [212..629] |
|
|
6.0E-85 | [188..613] | [194..644] |
|
Region A: Residues: [1-401] |
1 11 21 31 41 51
| | | | | |
1 MSARKRKFNS LKPLDTLNSS RASSPRSSAS LPPKRYNTFR KDPKIVDHLN NASTKDFLPV 60
61 LSMNSESKRQ IELSDNDVDN NDEGEGVNSG CSDQDFEPLQ SSPLKRHSSL KSTSNGLLFQ 120
121 MSNNLGNGSP EPAVASTSPN GSIISTKLNL NGQFSCVDSK TLRIYRHKAP CIMTFVSDHN 180
181 HPKFSLYFQQ SVIYNSQVNL LDDVELIILD KKNSFMAIIL KDLKKVKMIL DVNNSSININ 240
241 TNILIWSTAS SASNKKIKSI KRFLLMSYSS SIKVEILDHK EQILERLKHL IHPISSSSPS 300
301 LNMERAINST KNAFDSLRLK KTKLSTNDDE SPQIHTHFLS NKPHGLQSLT KRTRIASLGK 360
361 KEHSISVPKS NISPSDFYNT NGTETLQSHA VSQLRRSNRF K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [402-730] |
1 11 21 31 41 51
| | | | | |
1 DVSDPANSNS NSEFDDATTE FETPELFKPS LCYKFNDGSS YTITNQDFKC LFNKDWVNDS 60
61 ILDFFTKFYI ESSIEKSIIK REQVHLMSSF FYTKLISNPA DYYSNVKKWV NNTDLFSKKY 120
121 VVIPINISYH WFSCIITNLD AILDFHQNKD KNDAINSDEI SINNPLVNIL TFDSLRQTHS 180
181 REIDPIKEFL ISYALDKYSI QLDKTQIKMK TCPVPQQPNM SDCGVHVILN IRKFFENPVE 240
241 TIDVWKNSKI KSKHFTAKMI NKYFDKNERN SARKNLRHTL KLLQLNYISY LKKENLYEEV 300
301 MQMEEKKSTN INNNENYDDD DEEIQIIEN
|
| Detection Method: | |
| Confidence: | 120.31133 |
| Match: | 1euvA_ |
| Description: | Ulp1 protease C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [731-1034] |
1 11 21 31 41 51
| | | | | |
1 IDQSSKDNNA QLTSEPPCSR SSSISTTERE PTELHNSVVR QPTGEIITDN EDPVRAASPE 60
61 TASVSPPIRH NILKSSSPFI SESANETEQE EFTSPYFGRP SLKTRAKQFE GVSSPIKNDQ 120
121 ALSSTHDIMM PSPKPKRIYP SKKIPQLSSH VQSLSTDSME RQSSPNNTNI VISDTEQDSR 180
181 LGVNSESKNT SGIVNRDDSD VNLIGSSLPN VAEKNHDNTQ ESNGNNDSLG KILQNVDKEL 240
241 NEKLVDIDDV AFSSPTRGIP RTSATSKGSN AQLLSNYGDE NNQSQDSVWD EGRDNPILLE 300
301 DEDP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
