| Protein: | IRR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1150 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1150] | [1..1150] |
|
|
0.0 | [7..547] | [8..516] |
|
|
0.0 | [7..506] | [8..459] |
|
|
0.0 | [37..547] | [2..495] |
|
|
0.0 | [25..535] | [32..520] |
|
|
0.0 | [46..606] | [10..538] |
|
|
0.0 | [64..546] | [57..516] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MTAVRRSTRI RTKSQVIEED YDDEQNTSAQ HVESDKITAK TQHEEEEEQD TGESEESSSE 60
61 DDYEDQDDDD YVDTATAKRK SRKRKPKSAS NTSSKRQKKK PTSAQKSAVS HAPAYHRSKK 120
121 DQDQYLEIAK DFQPTELFDI LSTSEDVSIE ELLREWLETY SE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [163-1150] |
1 11 21 31 41 51
| | | | | |
1 NRDKFLQEFI NLLLNCCGSV ARVEDHDVHS NESSNETIGE IQLLFQRQKL HEFYLLISKE 60
61 NKKRKNFKMG PLYQNFAEFM TKLLEVANDL QLLYVESDED DTQIVTGNLV LDLLTWLSSF 120
121 SVCKIRCFRY ISTLTLYLFQ DYLTQQAVNL EKNYLAKLSK QLSLEEKKKR PNNKTLEKLE 180
181 STIAETQGSK VVIDSIIDNI VKLCFVHRYK DVSDLIRSES MLHLSIWIKN YPEYFLKVTF 240
241 LKYFGWLLSD NSVSVRLQVT KILPHLIIQN HNSKSTDNSA IRQVFERFKT KILEVAIRDV 300
301 NLDVRIHSIQ VLTEASSLGY LDDSEILIIS SLMFDEEFDP FKTSSFNKRS KFLSTVAKFL 360
361 ARVIKEKFDE FIKTHEDLPK EVDGLEVGPV VQVGIFIKIL NDSLIYHLKD CAEVDSRTKI 420
421 RMLTQAAEFL SPYISTHLKT ICNLLISDTE SNELIQKLQN SANNNSDDED VDDEELDITP 480
481 LFPIDRNSTI LYLNVFHGLC AGANNPKIQT KDSVKEIVLP LFYDLLNAAS IESADILCPL 540
541 LESFITFSLD DWISIGYETE LKKITDKTIK AFMDSTIGNS KVDMKYDIFA KFIHHIHHFE 600
601 KKELQEKFLN QIATLKIHLK KFLQEKMDPN NSRDDYKDLT CSLYELYINK LTILGRDYPI 660
661 EVDEELLQLF LNNFVSRIPI MFQDFDDSTA QEINFKMLVL LATWNLEKWR EIIEKVRDYE 720
721 NSISKDLRSV WKPIAAIIGR LNTLVISLAA TNETFENINS LFYLKWSACT SLMDIIVAIK 780
781 IFELKLPADA TTWRYSMSEQ FPFYLHDNAS KVLLKIFLYL ESLFAKQVDV QLERVADEDA 840
841 NLNDLPETGF FENIETEFLL FTVKLKGLMK LNILDERFAS RVALNKEKLG PLFKKIVDDT 900
901 IMENPEPNKK NIQKAKSNQT QREKAPLQPN SERETDHANT ENNDPDIPMT IDLEPIEESS 960
961 QNNSELAPIE EHPTVVDAID NSDEITQD
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | PF03365 |
| Description: | No description for PF03365 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.81296846555705 | bayes_pls_golite062009 |
| protein binding | 1.63424405980235 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.66737572008694 | bayes_pls_golite062009 |
| nucleic acid binding | 0.118461769548431 | bayes_pls_golite062009 |
|
Region A: Residues: [920-1150] |
1 11 21 31 41 51
| | | | | |
1 INSLFYLKWS ACTSLMDIIV AIKIFELKLP ADATTWRYSM SEQFPFYLHD NASKVLLKIF 60
61 LYLESLFAKQ VDVQLERVAD EDANLNDLPE TGFFENIETE FLLFTVKLKG LMKLNILDER 120
121 FASRVALNKE KLGPLFKKIV DDTIMENPEP NKKNIQKAKS NQTQREKAPL QPNSERETDH 180
181 ANTENNDPDI PMTIDLEPIE ESSQNNSELA PIEEHPTVVD AIDNSDEITQ D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
