Protein: | YIA6 |
Organism: | Saccharomyces cerevisiae |
Length: | 373 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIA6.
Description | E-value | Query Range |
Subject Range |
|
6.0E-83 | [1..373] | [1..373] |
|
1.0E-81 | [69..371] | [5..303] |
|
2.0E-81 | [72..365] | [3..298] |
|
3.0E-81 | [64..366] | [7..309] |
|
4.0E-81 | [69..371] | [5..303] |
|
7.0E-81 | [69..371] | [5..303] |
Region A: Residues: [1-72] |
1 11 21 31 41 51 | | | | | | 1 MTQTDNPVPN CGLLPEQQYC SADHEEPLLL HEEQLIFPDH SSQLSSADII EPIKMNSSTE 60 61 SIIGTTLRKK WV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [73-373] |
1 11 21 31 41 51 | | | | | | 1 PLSSTQITAL SGAFAGFLSG VAVCPLDVAK TRLQAQGLQT RFENPYYRGI MGTLSTIVRD 60 61 EGPRGLYKGL VPIVLGYFPT WMIYFSVYEF SKKFFHGIFP QFDFVAQSCA AITAGAASTT 120 121 LTNPIWVVKT RLMLQSNLGE HPTHYKGTFD AFRKLFYQEG FKALYAGLVP SLLGLFHVAI 180 181 HFPIYEDLKV RFHCYSRENN TNSINLQRLI MASSVSKMIA SAVTYPHEIL RTRMQLKSDI 240 241 PDSIQRRLFP LIKATYAQEG LKGFYSGFTT NLVRTIPASA ITLVSFEYFR NRLENISTMV 300 301 I |
Detection Method: | |
Confidence: | 7.55 |
Match: | 1is2A |
Description: | Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 |
Matching Structure (courtesy of the PDB): |