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View Structure Prediction Details

Protein: FLO5
Organism: Saccharomyces cerevisiae
Length: 1075 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLO5.

Description E-value Query
Range		 Subject
Range
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
 9.0E-99 [2..1073] [1246..2336]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 2.0E-88 [1..1050] [1..1039]
MUC1 - mucin 1, cell surface associated
 3.0E-86 [1..1024] [1..1041]
FLO5 - Lectin-like cell wall protein (flocculin) involved in flocculation, binds to mannose chains on the s...
FLO5_YEAST - Flocculation protein FLO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLO5 PE=1 SV=1
 3.0E-84 [1..1075] [1..1075]

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Predicted Domain #1
Region A:
Residues: [1-250] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIAHHCIFL VILAFLALIN VASGATEACL PAGQRKSGMN INFYQYSLKD SSTYSNAAYM  60
   61 AYGYASKTKL GSVGGQTDIS IDYNIPCVSS SGTFPCPQED SYGNWGCKGM GACSNSQGIA 120
  121 YWSTDLFGFY TTPTNVTLEM TGYFLPPQTG SYTFSFATVD DSAILSVGGS IAFECCAQEQ 180
  181 PPITSTNFTI NGIKPWDGSL PDNITGTVYM YAGYYYPLKV VYSNAVSWGT LPISVELPDG 240
  241 TTVSDNFEGY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [251-316] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYSFDDDLSQ SNCTIPDPSI HTTSTITTTT EPWTGTFTST STEMTTITDT NGQLTDETVI  60
   61 VIRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 20.060481
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-361] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TASTITTTTE PWTGTFTSTS TEMTTVTGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.29243
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [362-406] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLITTTTE PWTGTFTSTS TEMTTVTGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.522879
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [407-451] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLITTTTE PWTGTFTSTS TEVTTITGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.657577
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [452-496] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLITTTTE PWTGTFTSTS TEMTTVTGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.522879
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [497-541] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLISTTTE PWTGTFTSTS TEVTTITGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.920819
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [542-586] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLITTTTE PWTGTFTSTS TEMTTVTGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.522879
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [587-646] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLITRTTE PWTGTFTSTS TEVTTITGTN GQPTDETVIV IRTPTTAISS SLSSSSGQIT  60
   61

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.124939
Match: PF00624
Description: Flocculin repeat

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [647-1075] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSITSSRPII TPFYPSNGTS VISSSVISSS VTSSLVTSSS FISSSVISSS TTTSTSIFSE  60
   61 SSTSSVIPTS SSTSGSSESK TSSASSSSSS SSISSESPKS PTNSSSSLPP VTSATTGQET 120
  121 ASSLPPATTT KTSEQTTLVT VTSCESHVCT ESISSAIVST ATVTVSGVTT EYTTWCPIST 180
  181 TETTKQTKGT TEQTKGTTEQ TTETTKQTTV VTISSCESDI CSKTASPAIV STSTATINGV 240
  241 TTEYTTWCPI STTESKQQTT LVTVTSCESG VCSETTSPAI VSTATATVND VVTVYPTWRP 300
  301 QTTNEQSVSS KMNSATSETT TNTGAAETKT AVTSSLSRFN HAETQTASAT DVIGHSSSVV 360
  361 SVSETGNTMS LTSSGLSTMS QQPRSTPASS MVGSSTASLE ISTYAGSANS LLAGSGLSVF 420
  421 IASLLLAII

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle