| Protein: | MNL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 796 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MNL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..796] | [1..796] |
|
|
0.0 | [26..504] | [171..628] |
|
|
0.0 | [8..505] | [169..645] |
|
|
0.0 | [12..515] | [182..659] |
|
|
0.0 | [26..515] | [2..469] |
|
|
0.0 | [18..514] | [183..657] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MVCCLWVLLA LLLHLDHVAC EDDAYSFTSK ELKAYKQEVK ELFYFGFDNY LEHGYPYDEV 60
61 KPISCVPKKR NFEDPTDQGT NDILGNFTIT LIDSLTTIAI LEDRPQFLKA VRLVERTFPD 120
121 GNFDIDSTIQ VFEITIRVIG SLLSSHLYAT DPTKAVYLGD DYDGSLLRLA QNMADRLLPA 180
181 YLTSTGLPMP RRNIKRKWDV SEFPEFLETE NNVAAMASPM FEFTILSYLT GDPKYEKVTR 240
241 YAFDKTWSLR TGLDLLPMSF HPEKLTPYTP MTGIGASIDS LFEYALKGAI LFDDSELMEV 300
301 WNVA
|
|
Region B: Residues: [459-571] |
1 11 21 31 41 51
| | | | | |
1 QDRMETFVLS ETLKYLYLLF DEENELHNSA SDVIFSTEAH PMWLPQEVRS NYKRNAKFNN 60
61 SVYSSHLEIC QKKDREQAGE NTLSQRIVGF AKSIFHKGPP DEEATDPIID YTI
|
| Detection Method: |  |
| Confidence: | 439.9691 |
| Match: | 1fmiA_ |
| Description: | Class I alpha-1;2-mannosidase, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [305-458] |
1 11 21 31 41 51
| | | | | |
1 YEALKTNCKN DWFFANVMAD TGHLFVPWID SLSAFFSGLQ VLAGDLDDAI ANHLMFLKMW 60
61 NTFGGIPERW NFSPPEFPPL SPLERSGAVA LDNILPLEWY PLRPEFFEST YFLYRATKDP 120
121 FYLNIGVHLL KDLKQRFKSN CGFAGFQNVI TGEL
|
| Detection Method: | |
| Confidence: | 439.9691 |
| Match: | 1fmiA_ |
| Description: | Class I alpha-1;2-mannosidase, catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [572-796] |
1 11 21 31 41 51
| | | | | |
1 DTELPGTCSI KPHHVIGDEF WYSPMLSNFD RLFEIDSRFA ATLIKPSHMH NYNAIELEPG 60
61 FYNRWSNPQF STCLIPPTTE IFELLFDLPG YHQLNPLMLE NKTITFETFG GRSRLKIEKL 120
121 QIYQIDYYGD LITASTFQDV SRKDIFSNAC DAVASLYSPT YLYRVVAING RILPRHGSVQ 180
181 IKKHSPVLTS NGTREEDEFK MDGIGINDHS QLMLECTPII NLFIV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
