| Protein: | GPI16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 610 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI16.
| Description | E-value | Query Range |
Subject Range |
|
|
890.0 | [0..9] | [610..1] |
|
|
725.0 | [0..19] | [604..14] |
|
|
712.0 | [0..2] | [606..7] |
|
|
613.0 | [0..10] | [585..4] |
|
|
603.0 | [0..18] | [610..66] |
|
|
589.0 | [0..34] | [608..74] |
|
|
579.0 | [0..34] | [601..68] |
|
|
577.0 | [0..34] | [567..21] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MILTLAYFML GTLLLGVFAE DTVSQIGIND SLWYPYDEAL VLKPLPNNDL LLSFAFQLQS 60
61 EPFDPAVSSM SYDAYEHYTT FPRAIPPLLE STATRQFHLR FTRGFWDALS WGQL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.831 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
|
Region A: Residues: [115-267] |
1 11 21 31 41 51
| | | | | |
1 PHAGKEAGAS GVELWSQVQA MDQEQAFHNW KKLSNSLSGL FCSSLNFIDE SRTTFPRRSY 60
61 ASDIGAPLFN STEKLYLMRA SLPNEPICTE NLTPFIKLLP TRGKSGLTSL LDGHKLFDSL 120
121 WNSISLDIAT ICSEDEDALC HYEMDARIEM VTH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [268-610] |
1 11 21 31 41 51
| | | | | |
1 VPSALARGER PIPKPLDGNT LRCDTDKPFD SYQCFPLPEP SQTHFKLSQL FARPINNGNL 60
61 FANRPTRICA EVDRSTWTAF LSVDDTIFST HDNCFDLSND QNEGGSGYDF ILESTDTTKV 120
121 TPIVPVPIHV SRSLTGNGQD RGGMRIVFHN DNDTPVKLIY FESLPWFMRV YLSSLQITST 180
181 TSPQLQENDI ILDKYYLQAA DRKRPGHLEF TMLIPANTDI VMTYQFDKAL LQFAEYPPDA 240
241 NHGFEIDAAV ITVLSLESSS SLYEMRTSTL LLSLSTPDFS MPYNVIILTS TIMGLIFGML 300
301 YNLMVKRMVT VEEADKITLQ SGLKYKLLKL KEKFLGKKKT KTD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
