| Protein: | TOM71 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 639 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOM71.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-84 | [123..607] | [7..462] |
|
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2.0E-84 | [117..607] | [11..472] |
|
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2.0E-84 | [123..607] | [7..462] |
|
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3.0E-82 | [113..607] | [36..501] |
|
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5.0E-79 | [1..639] | [1..639] |
|
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1.0E-77 | [8..567] | [67..617] |
|
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3.0E-76 | [113..604] | [39..501] |
|
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1.0E-66 | [77..638] | [17..559] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MAENSLLRFI TKNKVAILAT VSAGTAAVGA YVYYQQIKQQ QQQQLKGTKD NRRQSEAFAG 60
61 QNEDEADLKD DGSVVSGSNK RKKKKNKRKR NNKAKSGEGF DYPSLPNGEP DIAQLKGLSP 120
121 S
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.202 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.213 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.313 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.270 | a.24.4 | Hemerythrin |
| View | Download | 0.313 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.270 | a.24.4 | Hemerythrin |
| View | Download | 0.240 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.240 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.213 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.202 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
|
Region A: Residues: [122-187] |
1 11 21 31 41 51
| | | | | |
1 QRQAYAVQLK NRGNHFFTAK NFNEAIKYYQ YAIELDPNEP VFYSNISACY ISTGDLEKVI 60
61 EFTTKA
|
| Detection Method: | |
| Confidence: | 114.594777 |
| Match: | 1a17__ |
| Description: | Protein phosphatase 5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [188-340] |
1 11 21 31 41 51
| | | | | |
1 LEIKPDHSKA LLRRASANES LGNFTDAMFD LSVLSLNGDF DGASIEPMLE RNLNKQAMKV 60
61 LNENLSKDEG RGSQVLPSNT SLASFFGIFD SHLEVSSVNT SSNYDTAYAL LSDALQRLYS 120
121 ATDEGYLVAN DLLTKSTDMY HSLLSANTVD DPL
|
| Detection Method: | |
| Confidence: | 9.85 |
| Match: | 1jcqA |
| Description: | Protein farnesyltransferase alpha-subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [341-443] |
1 11 21 31 41 51
| | | | | |
1 RENAALALCY TGIFHFLKNN LLDAQVLLQE SINLHPTPNS YIFLALTLAD KENSQEFFKF 60
61 FQKAVDLNPE YPPTYYHRGQ MYFILQDYKN AKEDFQKAQS LNP
|
| Detection Method: | |
| Confidence: | 59.70927 |
| Match: | 1elrA_ |
| Description: | Hop |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [444-639] |
1 11 21 31 41 51
| | | | | |
1 ENVYPYIQLA CLLYKQGKFT ESEAFFNETK LKFPTLPEVP TFFAEILTDR GDFDTAIKQY 60
61 DIAKRLEEVQ EKIHVGIGPL IGKATILARQ SSQDPTQLDE EKFNAAIKLL TKACELDPRS 120
121 EQAKIGLAQL KLQMEKIDEA IELFEDSAIL ARTMDEKLQA TTFAEAAKIQ KRLRADPIIS 180
181 AKMELTLARY RAKGML
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.874 | 0.276 | mitochondrial outer membrane | a.118.8 | TPR-like |
| View | Download | 0.863 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.750 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.672 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.647 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.635 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.591 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.586 | N/A | N/A | a.118.7 | 14-3-3 protein |
| View | Download | 0.523 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.513 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.486 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.468 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.444 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.436 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.417 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.414 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.411 | N/A | N/A | d.211.1 | Ankyrin repeat |
| View | Download | 0.410 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.392 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.377 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.368 | N/A | N/A | c.66.1 | S-adenosyl-L-methionine-dependent methyltransferases |
| View | Download | 0.354 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.339 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.337 | N/A | N/A | c.100.1 | Thiamin pyrophosphokinase, catalytic domain |
| View | Download | 0.333 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
| View | Download | 0.331 | N/A | N/A | d.211.1 | Ankyrin repeat |
| View | Download | 0.323 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.320 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.294 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.292 | N/A | N/A | f.1.1 | Colicin |
| View | Download | 0.281 | N/A | N/A | c.61.1 | PRTase-like |
| View | Download | 0.281 | N/A | N/A | a.102.1 | Six-hairpin glycosyltransferases |
| View | Download | 0.264 | N/A | N/A | c.1.8 | (Trans)glycosidases |
| View | Download | 0.262 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.258 | N/A | N/A | c.23.5 | Flavoproteins |
| View | Download | 0.254 | N/A | N/A | e.40.1 | Cullin homology domain |
| View | Download | 0.254 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.251 | N/A | N/A | c.43.1 | CoA-dependent acyltransferases |
| View | Download | 0.246 | N/A | N/A | a.99.1 | Cryptochrome/photolyase FAD-binding domain |
| View | Download | 0.241 | N/A | N/A | a.173.1 | tRNA CCA-adding enzyme, C-terminal domains |
| View | Download | 0.240 | N/A | N/A | c.10.1 | RNI-like |
| View | Download | 0.236 | N/A | N/A | d.3.1 | Cysteine proteinases |
| View | Download | 0.235 | N/A | N/A | a.1.2 | alpha-helical ferredoxin |
| View | Download | 0.231 | N/A | N/A | c.69.1 | alpha/beta-Hydrolases |
| View | Download | 0.231 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.229 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.226 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.226 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.224 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.223 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.222 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.222 | N/A | N/A | a.92.1 | Carbamoyl phosphate synthetase, large subunit connection domain |
| View | Download | 0.221 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.220 | N/A | N/A | a.118.6 | Protein prenylyltransferase |
| View | Download | 0.220 | N/A | N/A | a.168.1 | GEF domain of SopE toxin |
| View | Download | 0.213 | N/A | N/A | a.89.1 | Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |
| View | Download | 0.210 | N/A | N/A | c.8.5 | GroEL apical domain-like |
| View | Download | 0.208 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.206 | N/A | N/A | c.26.1 | Nucleotidylyl transferase |
| View | Download | 0.205 | N/A | N/A | a.102.4 | Terpenoid cylases/Protein prenyltransferases |
| View | Download | 0.204 | N/A | N/A | a.89.1 | Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |
| View | Download | 0.203 | N/A | N/A | a.87.1 | DBL homology domain (DH-domain) |
