| Protein: | CDC12 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 407 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC12.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..383] | [111..482] |
|
|
0.0 | [3..407] | [18..411] |
|
|
0.0 | [4..407] | [19..411] |
|
|
3.0E-98 | [14..363] | [124..474] |
|
|
1.0E-96 | [9..398] | [7..389] |
|
Region A: Residues: [1-274] |
1 11 21 31 41 51
| | | | | |
1 MSAATATAAP VPPPVGISNL PNQRYKIVNE EGGTFTVMLC GESGLGKTTF INTLFQTVLK 60
61 RADGQQHRQE PIRKTVEIDI TRALLEEKHF ELRVNVIDTP GFGDNVNNNK AWQPLVDFID 120
121 DQHDSYMRQE QQPYRTKKFD LRVHAVLYFI RPTGHGLKPI DIETMKRLST RANLIPVIAK 180
181 ADTLTAQELQ QFKSRIRQVI EAQEIRIFTP PLDADSKEDA KSGSNPDSAA VEHARQLIEA 240
241 MPFAIVGSEK KFDNGQGTQV VARKYPWGLV EIEN
|
| Detection Method: |  |
| Confidence: | 19.30103 |
| Match: | 1egaA_ |
| Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [275-407] |
1 11 21 31 41 51
| | | | | |
1 DSHCDFRKLR ALLLRTYLLD LISTTQEMHY ETYRRLRLEG HENTGEGNED FTLPAIAPAR 60
61 KLSHNPRYKE EENALKKYFT DQVKAEEQRF RQWEQNIVNE RIRLNGDLEE IQGKVKKLEE 120
121 QVKSLQVKKS HLK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.927 | 0.025 | axial cellular bud site selection | a.7.4 | Smac/diablo |
