| Protein: | LRP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 184 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRP1.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..24] | [171..62] |
|
|
101.0 | [0..1] | [179..1] |
|
|
89.0 | [0..1] | [152..1] |
|
|
76.0 | [0..1] | [178..1] |
|
|
60.0 | [0..2] | [143..3] |
|
|
53.0 | [0..1] | [144..1] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MEDIEKIKPY VRSFSKALDE LKPEIEKLTS KSLDEQLLLL SDERAKLELI NRYAYVLSSL 60
61 MFANMKVLGV KDMSPILGEL KRVKSYMDKA KQYDNRITKS NEKSQAEQEK AKNIISNVLD 120
121 GNKNQFEPSI SRSNFQGKHT KFENDELAES TTTKIIDSTD HIRKASSKKS KRLDKVGKKK 180
181 GGKK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.652 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.421 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.421 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.413 | f.21.3 | Description not found. |
| View | Download | 0.381 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.381 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.364 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.364 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.348 | b.91.1 | E2 regulatory, transactivation domain |
| View | Download | 0.311 | a.25.1 | Ferritin-like |
