Protein: | PPE1 |
Organism: | Saccharomyces cerevisiae |
Length: | 400 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPE1.
Description | E-value | Query Range |
Subject Range |
|
1.0E-89 | [1..400] | [1..400] |
|
7.0E-52 | [83..378] | [2..284] |
|
1.0E-51 | [83..378] | [2..284] |
|
1.0E-51 | [88..384] | [4..281] |
|
3.0E-51 | [83..379] | [2..285] |
|
6.0E-51 | [83..378] | [2..284] |
|
7.0E-51 | [90..378] | [9..284] |
|
8.0E-51 | [98..384] | [243..549] |
|
9.0E-51 | [88..384] | [4..281] |
Region A: Residues: [1-89] |
1 11 21 31 41 51 | | | | | | 1 MSDDLRRKIA LSQFERAKNV LDATFQEAYE DDENDGDALG SLPSFNGQSN RNRKYTGKTG 60 61 STTDRISSKE KSSLPTWSDF FDNKELVSL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [90-400] |
1 11 21 31 41 51 | | | | | | 1 PDRDLDVNTY YTLPTSLLSN TTSIPIFIFH HGAGSSGLSF ANLAKELNTK LEGRCGCFAF 60 61 DARGHAETKF KKADAPICFD RDSFIKDFVS LLNYWFKSKI SQEPLQKVSV ILIGHSLGGS 120 121 ICTFAYPKLS TELQKKILGI TMLDIVEEAA IMALNKVEHF LQNTPNVFES INDAVDWHVQ 180 181 HALSRLRSSA EIAIPALFAP LKSGKVVRIT NLKTFSPFWD TWFTDLSHSF VGLPVSKLLI 240 241 LAGNENLDKE LIVGQMQGKY QLVVFQDSGH FIQEDSPIKT AITLIDFWKR NDSRNVVIKT 300 301 NWGQHKTVQN T |
Detection Method: | ![]() |
Confidence: | 48.09691 |
Match: | 1cqzA_ |
Description: | Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain |
Matching Structure (courtesy of the PDB):![]() |