| Protein: | STP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 541 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STP2.
| Description | E-value | Query Range |
Subject Range |
|
|
676.0 | [0..15] | [491..2427] |
|
|
666.0 | [0..3] | [479..260] |
|
|
659.0 | [0..3] | [479..344] |
|
|
655.0 | [0..5] | [498..378] |
|
|
650.0 | [0..1] | [504..309] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MPILSLSSTR NSVLTRIYDY LKALVQQVIV PNVEDDKSSK STPFEKLEPA KQNHPQKDCC 60
61 ATEKDDLVDV SELFPKQNNK QLSLTSKSSV VPCALNLDNL ETPFSIKIDN NGAVTTQLNL 120
121 DEPILRGPSR GEPAKLQNDL ISS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [144-225] |
1 11 21 31 41 51
| | | | | |
1 PPLEESYINN DQYKALFPSN FLPITPVSSV ITPASKKSID ESPLSDEVQG IADESSETLP 60
61 YICHYCDARF RIRGYLTRHI KK
|
| Detection Method: | |
| Confidence: | 55.512579 |
| Match: | 1lu6A_ |
| Description: | No description for 1lu6A_ was found. |
|
Region A: Residues: [226-277] |
1 11 21 31 41 51
| | | | | |
1 HAKRKAYHCP FFDNSISQEL RCHTSGGFSR RDTYKTHLKS RHFTYPEGVK PQ
|
| Detection Method: | |
| Confidence: | 55.512579 |
| Match: | 1lu6A_ |
| Description: | No description for 1lu6A_ was found. |
|
Region A: Residues: [278-470] |
1 11 21 31 41 51
| | | | | |
1 DRNKSPGVCT QCGEHFSTSE SWVENHIEAG SCKGLPEGYS EGIREKKKTS KMKMIKTSDG 60
61 QTRFISSDES VSEPALQNKN CIEATVMQSK ERPNDKIIPT KTEKNDFGIG TQWFERKQIS 120
121 RPTQTTQSRG PTEVQNLKEW SIISPPILSP QNASSVPQEY QSSRYTLHMD SPALSSASSA 180
181 LSPLSGDPIT TTE
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-541] |
1 11 21 31 41 51
| | | | | |
1 TNKSYPLDSE QSLLEPDKTE EDAINQSKES NMISINEMLQ KQMDFELLGE NHLKETQDYL 60
61 ALYKKAYGIE F
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
