| Protein: | STP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 541 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STP2.
| Description | E-value | Query Range |
Subject Range |
|
|
676.0 | [0..15] | [491..2427] |
|
|
666.0 | [0..3] | [479..260] |
|
|
659.0 | [0..3] | [479..344] |
|
|
655.0 | [0..5] | [498..378] |
|
|
650.0 | [0..1] | [504..309] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MPILSLSSTR NSVLTRIYDY LKALVQQVIV PNVEDDKSSK STPFEKLEPA KQNHPQKDCC 60
61 ATEKDDLVDV SELFPKQNNK QLSLTSKSSV VPCALNLDNL ETPFSIKIDN NGAVTTQLNL 120
121 DEPILRGPSR GEPAKLQNDL ISS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.437 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.398 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.366 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.342 | N/A | N/A | b.85.7 | SET domain |
|
Region A: Residues: [144-225] |
1 11 21 31 41 51
| | | | | |
1 PPLEESYINN DQYKALFPSN FLPITPVSSV ITPASKKSID ESPLSDEVQG IADESSETLP 60
61 YICHYCDARF RIRGYLTRHI KK
|
| Detection Method: | |
| Confidence: | 55.512579 |
| Match: | 1lu6A_ |
| Description: | No description for 1lu6A_ was found. |
|
Region A: Residues: [226-277] |
1 11 21 31 41 51
| | | | | |
1 HAKRKAYHCP FFDNSISQEL RCHTSGGFSR RDTYKTHLKS RHFTYPEGVK PQ
|
| Detection Method: | |
| Confidence: | 55.512579 |
| Match: | 1lu6A_ |
| Description: | No description for 1lu6A_ was found. |
|
Region A: Residues: [278-470] |
1 11 21 31 41 51
| | | | | |
1 DRNKSPGVCT QCGEHFSTSE SWVENHIEAG SCKGLPEGYS EGIREKKKTS KMKMIKTSDG 60
61 QTRFISSDES VSEPALQNKN CIEATVMQSK ERPNDKIIPT KTEKNDFGIG TQWFERKQIS 120
121 RPTQTTQSRG PTEVQNLKEW SIISPPILSP QNASSVPQEY QSSRYTLHMD SPALSSASSA 180
181 LSPLSGDPIT TTE
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-541] |
1 11 21 31 41 51
| | | | | |
1 TNKSYPLDSE QSLLEPDKTE EDAINQSKES NMISINEMLQ KQMDFELLGE NHLKETQDYL 60
61 ALYKKAYGIE F
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.741 | a.218.1 | Description not found. |
| View | Download | 0.567 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.519 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.480 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.470 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.465 | a.126.1 | Serum albumin-like |
| View | Download | 0.465 | a.126.1 | Serum albumin-like |
| View | Download | 0.401 | a.60.8 | HRDC-like |
| View | Download | 0.339 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.204 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.201 | a.159.4 | Description not found. |
