YRC Public Data Repository - Protein Structure Prediction

Protein:	QCR10
Organism:	Saccharomyces cerevisiae
Length:	77 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QCR10.

Description	E-value	Query Range	Subject Range
QCR10 - Subunit of the ubiqunol-cytochrome c oxidoreductase complex which includes Cobp, Rip1p, Cyt1p, Cor1p... QCR10_YEAST - Cytochrome b-c1 complex subunit 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR10... gi\|151943941 - gi\|151943941\|gb\|EDN62234.1\| ubiquinol-cytochrome c oxidoreductase complex subunit [Saccharomyces cer... gi\|190405783 - gi\|190405783\|gb\|EDV09050.1\| ubiqunol-cytochrome c oxidoreductase complex 8.5 kDa subunit [Saccharomy...	7.0E-38	[1..77]	[1..77]
QCR10_SCHPO - Cytochrome b-c1 complex subunit 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr10 P... qcr10 - ubiquinol-cytochrome-c reductase complex subunit Qcr10	0.005	[28..75]	[30..77]

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Predicted Domain #1

Region A:
Residues: [1-77]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYTSHLSSK TGLHFGRLSL RSLTAYAPNL MLWGGASMLG LFVFTEGWPK FQDTLYKKIP  60
   61 LLGPTLEDHT PPEDKPN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
ubiquinol-cytochrome-c reductase activity	10.1028886160278	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor	10.1028886160278	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors	6.75225281715998	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	4.4081539282495	bayes_pls_golite062009
oxidoreductase activity	4.28747691998167	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	4.27348544491031	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	3.76124810334156	bayes_pls_golite062009
cation transmembrane transporter activity	3.60982901227183	bayes_pls_golite062009
ion transmembrane transporter activity	3.45879580383662	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	3.13341956830145	bayes_pls_golite062009
substrate-specific transporter activity	3.00371441370893	bayes_pls_golite062009
electron carrier activity	2.63052948692598	bayes_pls_golite062009
catalytic activity	0.424166454243546	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: