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View Structure Prediction Details

Protein: QCR10
Organism: Saccharomyces cerevisiae
Length: 77 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QCR10.

Description E-value Query
Range
Subject
Range
QCR10 - Subunit of the ubiqunol-cytochrome c oxidoreductase complex which includes Cobp, Rip1p, Cyt1p, Cor1p...
QCR10_YEAST - Cytochrome b-c1 complex subunit 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR10...
gi|151943941 - gi|151943941|gb|EDN62234.1| ubiquinol-cytochrome c oxidoreductase complex subunit [Saccharomyces cer...
gi|190405783 - gi|190405783|gb|EDV09050.1| ubiqunol-cytochrome c oxidoreductase complex 8.5 kDa subunit [Saccharomy...
7.0E-38 [1..77] [1..77]
QCR10_SCHPO - Cytochrome b-c1 complex subunit 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr10 P...
qcr10 - ubiquinol-cytochrome-c reductase complex subunit Qcr10
0.005 [28..75] [30..77]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYTSHLSSK TGLHFGRLSL RSLTAYAPNL MLWGGASMLG LFVFTEGWPK FQDTLYKKIP  60
   61 LLGPTLEDHT PPEDKPN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.509 a.4.5 "Winged helix" DNA-binding domain
View Download 0.455 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.501 d.120.1 Cytochrome b5
View Download 0.460 a.77.1 DEATH domain
View Download 0.608 a.60.5 Barrier-to-autointegration factor, BAF
View Download 0.431 a.4.5 "Winged helix" DNA-binding domain
View Download 0.425 a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.422 a.144.1 PABC (PABP) domain
View Download 0.413 a.83.1 Guanido kinase N-terminal domain
View Download 0.406 d.58.17 Metal-binding domain
View Download 0.400 d.68.3 SirA-like
View Download 0.389 a.4.1 Homeodomain-like
View Download 0.378 a.61.1 Retroviral matrix proteins
View Download 0.371 a.4.5 "Winged helix" DNA-binding domain
View Download 0.366 a.118.8 TPR-like
View Download 0.362 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.360 b.34.1 C-terminal domain of transcriptional repressors
View Download 0.359 a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.351 d.58.38 Urease metallochaperone UreE, C-terminal domain
View Download 0.341 g.3.7 Scorpion toxin-like
View Download 0.335 a.60.2 RuvA domain 2-like
View Download 0.323 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.323 d.68.3 SirA-like
View Download 0.322 a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.306 a.4.2 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
View Download 0.304 d.58.24 CheY-binding domain of CheA
View Download 0.301 d.58.1 4Fe-4S ferredoxins
View Download 0.295 d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase
View Download 0.291 a.150.1 Anti-sigma factor AsiA
View Download 0.290 d.58.7 RNA-binding domain, RBD
View Download 0.289 d.45.1 ClpS-like
View Download 0.288 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.284 a.4.5 "Winged helix" DNA-binding domain
View Download 0.272 d.58.8 Viral DNA-binding domain
View Download 0.266 a.39.1 EF-hand
View Download 0.261 a.138.1 Multiheme cytochromes
View Download 0.259 a.77.1 DEATH domain
View Download 0.256 a.74.1 Cyclin-like
View Download 0.244 a.77.1 DEATH domain
View Download 0.231 a.4.1 Homeodomain-like
View Download 0.225 a.4.11 RNA polymerase subunit RPB10
View Download 0.220 d.58.7 RNA-binding domain, RBD
View Download 0.215 a.44.1 Disulphide-bond formation facilitator (DSBA), insertion domain
View Download 0.213 d.58.14 Ribosomal protein S6
View Download 0.213 a.4.1 Homeodomain-like
View Download 0.208 a.77.1 DEATH domain
View Download 0.208 a.4.5 "Winged helix" DNA-binding domain
View Download 0.207 a.77.1 DEATH domain
View Download 0.204 a.74.1 Cyclin-like

Predicted functions:

Term Confidence Notes
ubiquinol-cytochrome-c reductase activity 10.1028886160278 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 10.1028886160278 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors 6.75225281715998 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 4.4081539282495 bayes_pls_golite062009
oxidoreductase activity 4.28747691998167 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 4.27348544491031 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 3.76124810334156 bayes_pls_golite062009
cation transmembrane transporter activity 3.60982901227183 bayes_pls_golite062009
ion transmembrane transporter activity 3.45879580383662 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.13341956830145 bayes_pls_golite062009
substrate-specific transporter activity 3.00371441370893 bayes_pls_golite062009
electron carrier activity 2.63052948692598 bayes_pls_golite062009
catalytic activity 0.424166454243546 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle