YRC Public Data Repository - Protein Structure Prediction

Protein:	YGR251W
Organism:	Saccharomyces cerevisiae
Length:	196 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR251W.

Description	E-value	Query Range	Subject Range
gi\|44983945 - gi\|44983945\|gb\|AAS52981.1\| AER300Cp [Ashbya gossypii ATCC 10895] gi\|45190903, gi\|... - gi\|45190903\|ref\|NP_985157.1\| AER300Cp [Ashbya gossypii ATCC 10895], gi\|44983945\|gb\|AAS52981.1\| AER30...	120.0	[0..1]	[195..1]
gi\|50289847, gi\|... - gi\|50289847\|ref\|XP_447355.1\| hypothetical protein CAGL0I02376g [Candida glabrata CBS138], gi\|4952666... gi\|49526665 - gi\|49526665\|emb\|CAG60292.1\| unnamed protein product [Candida glabrata]	117.0	[0..1]	[193..1]
gi\|49640359, gi\|... - gi\|50302585\|ref\|XP_451228.1\| unnamed protein product [Kluyveromyces lactis], gi\|49640359\|emb\|CAH0281... gi\|49640359 - gi\|49640359\|emb\|CAH02816.1\| KLLA0A05181p [Kluyveromyces lactis]	115.0	[0..1]	[195..1]
gi\|49658107, gi\|... - gi\|50427649\|ref\|XP_462437.1\| hypothetical protein DEHA0G21923g [Debaryomyces hansenii CBS767], gi\|49...	56.0	[0..1]	[196..1]

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Predicted Domain #1

Region A:
Residues: [1-196]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRAKELQEK LNLQAKLQST FSNNTAAVLD WLKESDETGI SNDTERNKQL KDHKELEDGK  60
   61 KAFFKLPVLQ IGSGLHFRTQ DDASAKEDIH TIGEFIEGDK KVSSLAKKKK RSDPGLQRNN 120
  121 MYRITKDDTK AMIALKRKMR KGEKEGLRKK QEHSKSSVSN SYSASDEEDE DAGTMPQKST 180
  181 KKKFGLLFDK KKKARK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits