| Protein: | PCT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 424 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..424] | [1..424] |
|
|
2.0E-84 | [89..350] | [13..270] |
|
|
3.0E-83 | [28..359] | [9..342] |
|
|
3.0E-83 | [28..359] | [9..342] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MANPTTGKSS IRAKLSNSSL SNLFKKNKNK RQREETEEQD NEDKDESKNQ DENKDTQLTP 60
61 RKRRRLTKEF EEKEARYTNE LPKELRKYRP KGFRFNLPPT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [101-251] |
1 11 21 31 41 51
| | | | | |
1 DRPIRIYADG VFDLFHLGHM KQLEQCKKAF PNVTLIVGVP SDKITHKLKG LTVLTDKQRC 60
61 ETLTHCRWVD EVVPNAPWCV TPEFLLEHKI DYVAHDDIPY VSADSDDIYK PIKEMGKFLT 120
121 TQRTNGVSTS DIITKIIRDY DKYLMRNFAR G
|
| Detection Method: | |
| Confidence: | 101.68867 |
| Match: | 1cozA_ |
| Description: | CTP:glycerol-3-phosphate cytidylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 2.3170925937521 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 2.3170925937521 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 2.30614862840764 | bayes_pls_golite062009 |
| ligase activity | 1.60661539954645 | bayes_pls_golite062009 |
| choline-phosphate cytidylyltransferase activity | 1.17908309674238 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.09399774252228 | bayes_pls_golite062009 |
| binding | 0.965037527908742 | bayes_pls_golite062009 |
| nucleic acid binding | 0.264094677839184 | bayes_pls_golite062009 |
|
Region A: Residues: [252-424] |
1 11 21 31 41 51
| | | | | |
1 ATRQELNVSW LKKNELEFKK HINEFRSYFK KNQTNLNNAS RDLYFEVREI LLKKTLGKKL 60
61 YSKLIGNELK KQNQRQRKQN FLDDPFTRKL IREASPATEF ANEFTGENST AKSPDDNGNL 120
121 FSQEDDEDTN SNNTNTNSDS DSNTNSTPPS EDDDDNDRLT LENLTQKKKQ SAN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.734 | 0.882 | Golgi apparatus | a.118.8 | TPR-like |
