| Protein: | PCT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 424 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..424] | [1..424] |
|
|
2.0E-84 | [89..350] | [13..270] |
|
|
3.0E-83 | [28..359] | [9..342] |
|
|
3.0E-83 | [28..359] | [9..342] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MANPTTGKSS IRAKLSNSSL SNLFKKNKNK RQREETEEQD NEDKDESKNQ DENKDTQLTP 60
61 RKRRRLTKEF EEKEARYTNE LPKELRKYRP KGFRFNLPPT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.416 | b.36.1 | PDZ domain-like |
| View | Download | 0.396 | a.77.1 | DEATH domain |
| View | Download | 0.251 | a.11.2 | Second domain of FERM |
| View | Download | 0.399 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.488 | a.130.1 | Chorismate mutase II |
| View | Download | 0.260 | a.4.12 | TrpR-like |
| View | Download | 0.424 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.370 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.365 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.399 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.370 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.360 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.355 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.349 | d.26.1 | FKBP-like |
| View | Download | 0.339 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.304 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.281 | a.3.1 | Cytochrome c |
| View | Download | 0.276 | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.274 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.271 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.266 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.260 | a.4.12 | TrpR-like |
| View | Download | 0.251 | a.11.2 | Second domain of FERM |
| View | Download | 0.249 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.229 | a.39.1 | EF-hand |
| View | Download | 0.222 | d.15.4 | 2Fe-2S ferredoxin-like |
| View | Download | 0.219 | d.82.2 | Frataxin-like |
| View | Download | 0.213 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.211 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.209 | d.58.49 | YajQ-like |
| View | Download | 0.205 | d.150.1 | 4'-phosphopantetheinyl transferase |
|
Region A: Residues: [101-251] |
1 11 21 31 41 51
| | | | | |
1 DRPIRIYADG VFDLFHLGHM KQLEQCKKAF PNVTLIVGVP SDKITHKLKG LTVLTDKQRC 60
61 ETLTHCRWVD EVVPNAPWCV TPEFLLEHKI DYVAHDDIPY VSADSDDIYK PIKEMGKFLT 120
121 TQRTNGVSTS DIITKIIRDY DKYLMRNFAR G
|
| Detection Method: | |
| Confidence: | 101.68867 |
| Match: | 1cozA_ |
| Description: | CTP:glycerol-3-phosphate cytidylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 2.3170925937521 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 2.3170925937521 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 2.30614862840764 | bayes_pls_golite062009 |
| ligase activity | 1.60661539954645 | bayes_pls_golite062009 |
| choline-phosphate cytidylyltransferase activity | 1.17908309674238 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.09399774252228 | bayes_pls_golite062009 |
| binding | 0.965037527908742 | bayes_pls_golite062009 |
| nucleic acid binding | 0.264094677839184 | bayes_pls_golite062009 |
|
Region A: Residues: [252-424] |
1 11 21 31 41 51
| | | | | |
1 ATRQELNVSW LKKNELEFKK HINEFRSYFK KNQTNLNNAS RDLYFEVREI LLKKTLGKKL 60
61 YSKLIGNELK KQNQRQRKQN FLDDPFTRKL IREASPATEF ANEFTGENST AKSPDDNGNL 120
121 FSQEDDEDTN SNNTNTNSDS DSNTNSTPPS EDDDDNDRLT LENLTQKKKQ SAN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.734 | 0.882 | Golgi apparatus | a.118.8 | TPR-like |
| View | Download | 0.237 | 0.882 | Golgi apparatus | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.734 | 0.882 | Golgi apparatus | a.118.8 | TPR-like |
| View | Download | 0.531 | 0.882 | Golgi apparatus | a.118.8 | TPR-like |
| View | Download | 0.237 | 0.882 | Golgi apparatus | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
