| Protein: | PMT6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 759 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMT6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [43..758] | [36..739] |
|
|
0.0 | [1..759] | [1..759] |
|
|
0.0 | [24..758] | [4..740] |
|
|
0.0 | [29..758] | [15..747] |
|
|
0.0 | [9..757] | [3..737] |
|
|
0.0 | [39..756] | [26..749] |
|
|
0.0 | [1..756] | [1..746] |
|
Region A: Residues: [1-337] |
1 11 21 31 41 51
| | | | | |
1 MSKAKGTGFS SIDTEDENLR ERYVNQPKAN ASDIQDEQLD CFEQLEEKHR TKKNEEYTAL 60
61 KILRDVIGPL LLTITSFYLR FQHIDQNNYV VWDEAHFGKF GSYYIKHEYY HDVHPPLGKM 120
121 LIALSEWMAG FDGQFDFSSN NAYPENVNFK LMRQFNATFG ALCTPVAFFT AKWMGFNYFT 180
181 VYLIATMVTL EHSYIVLSKF ILLDSMLLFF SMTTFACMIK LYTLRKQQMT KKWSLWMLLT 240
241 GLSIGCVCSV KWVGLFITVV VGLYTCIELF LLYCDKELPR IKYYKHWLIR IINLIVIPFL 300
301 IYLYCFKIHF VLLYKSGTGD STTNTLFQIN LEGTQIE
|
| Detection Method: |  |
| Confidence: | 100.366532 |
| Match: | PF02366 |
| Description: | Dolichyl-phosphate-mannose-protein mannosyltransferase |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [338-400] |
1 11 21 31 41 51
| | | | | |
1 AGPRDVAFGS ELTIRSHGLS PNLLHSHIQV YPEGSGQRQI TGYGFADSNN VWKFEFSRSS 60
61 GLE
|
| Detection Method: | |
| Confidence: | 13.60206 |
| Match: | PF02815 |
| Description: | MIR domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [401-538] |
1 11 21 31 41 51
| | | | | |
1 LDQNGTLNGK IIPITDGVEV RLSHKNTGSN LHSHDVPSHV SRGNYEVSGY GSQSVGDEKD 60
61 DWIVEIVKQM DSPNPVYSNE NSTILHPVST FFRLRHKVLG CYLASTGLTY PAWGFKQAEI 120
121 VCKDSWSRRD KSTWWNVE
|
| Detection Method: | |
| Confidence: | 11.09 |
| Match: | 1n4kA |
| Description: | IP3 receptor type 1 binding core, domain 2; IP3 receptor type 1 binding core, domain 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [539-759] |
1 11 21 31 41 51
| | | | | |
1 DHWNHNLETA EDYVPPKSNF WTDFILTNFA MASSNNALVP DEDKYDSLSS DAWEWPTLHK 60
61 GLRMCSWAGY ITRYYLMGSP FNTWISTVSL IIFPFIILFI LYRWRRQTLY LSDDQIWQIT 120
121 IQGIFPFISW MTHYLPFAMM GRVTYVHHYV PALYFAMLVF GFVLDFTLTR VHWMVKYPIY 180
181 LSLFGGCIYI YNLFAPICQG MHGDKAEYLP LQWLSTWDIA P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [648-759] |
1 11 21 31 41 51
| | | | | |
1 YLSDDQIWQI TIQGIFPFIS WMTHYLPFAM MGRVTYVHHY VPALYFAMLV FGFVLDFTLT 60
61 RVHWMVKYPI YLSLFGGCIY IYNLFAPICQ GMHGDKAEYL PLQWLSTWDI AP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
