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View Structure Prediction Details

Protein: BTN2
Organism: Saccharomyces cerevisiae
Length: 410 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BTN2.

Description E-value Query
Range
Subject
Range
BTN2_YEAST - Protein BTN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BTN2 PE=1 SV=1
BTN2 - v-SNARE binding protein that facilitates specific protein retrieval from a late endosome to the Golg...
0.0 [1..410] [1..410]
MAP1A_RAT - Microtubule-associated protein 1A OS=Rattus norvegicus GN=Map1a PE=1 SV=1
2.0E-37 [193..409] [1335..1554]
MY18A_MOUSE, M18... - (Q9JMH9) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain) (Molecule associated with JAK3 N-...
2.0E-33 [122..391] [1633..1917]
gi|8163714 - gi|8163714|gb|AAF73817.1|AF154044_1 surface protein PspC [Streptococcus pneumoniae]
8.0E-29 [153..409] [35..270]
gi|12718849 - gi|12718849|gb|AAK02016.1|AF126833_1 enterophilin-1 [Cavia porcellus]
2.0E-27 [115..406] [72..331]
gi|13345187 - gi|13345187|gb|AAK19244.1|AF312916_1 reticulocyte binding protein 2 homolog A [Plasmodium falciparum...
2.0E-27 [126..402] [2608..2873]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
5.0E-27 [115..394] [240..537]
gi|559543 - gi|559543|gb|AAB58346.1| p93 antigen
9.0E-27 [115..394] [240..537]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSIFNSPCV FEQLPSFSQP LHSRYFDCSS PVSYYPECKR RKAIKANLRA PKKSDANCSE  60
   61 PLRYALAETP NGYTLSLSKR IPYELFSKYV NEKLGELKEN HYRPTYHVVQ DFFG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQYYVEDEAD EDALLRSALK DLDFRAIGKK IAKDLFQDYE IELNHRGDEL SILSKKDKIF  60
   61 KEFSLDQVFE DVFVIGCGVE NIDDGSREKY ALLKIGLVKH EEEISEGGIN EPKMPIIESK 120
  121 IDESHDDVNM SESLKEEEAE KAKEPLTKED QIKKWIEEER LMQEESRKSE QEKAAKEDEE 180
  181 RQKKEKEARL KARKESLINK QKTKRSQQKK LQNSKSLPIS EIEASNKNNN SNSGSAESDN 240
  241 ESINSDSDTT LDFSVSGNTL KKHASPLLED VEDEEVDRYN ESLSRSPKGN SIIEEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 1i84S_
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle