| Protein: | CBF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 956 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBF2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..956] | [1..956] |
|
Region A: Residues: [1-956] |
1 11 21 31 41 51
| | | | | |
1 MRSSILFLLK LMKIMDVQQQ QEAMSSEDRF QELVDSLKPR TAHQYKTYYT KYIQWCQLNQ 60
61 IIPTPEDNSV NSVPYKDLPI SAELIHWFLL DTLITDDKPG EKREETEDLD EEEENSFKIA 120
121 TLKKIIGSLN FLSKLCKVHE NPNANIDTKY LESVTKLHTH WIDSQKAITT NETNNTNTQV 180
181 LCPPLLKVSL NLWNPETNHL SEKFFKTCSE KLRFLVDFQL RSYLNLSFEE RSKIRFGSLK 240
241 LGKRDRDAII YHKVTHSAEK KDTPGHHQLL ALLPQDCPFI CPQTTLAAYL YLRFYGIPSV 300
301 SKGDGFPNLN ADENGSLLQD IPILRGKSLT TYPREETFSN YYTTVFRYCH LPYKRREYFN 360
361 KCNLVYPTWD EDTFRTFFNE ENHGNWLEQP EAFAFPDKIP FDFKKIMNFK SPYTSYSTNA 420
421 KKDPFPPPKD LLVQIFPEID EYKRHDYEGL SQNSRDFLDL MEVLRERFLS NLPWIYKFFP 480
481 NHDIFQDPIF GNSDFQSYFN DKTIHSKGSP ILSFDILPGF NKIYKNKTNF YSLLIERPSQ 540
541 LTFASSHNPD THPTQKQESE GPLQMSQLDT TQLNELLKQQ SFEYVQFQTL SNFQILLSVF 600
601 NKIFEKLEMK KSSRGYILHQ LNLFKITLDE RIKKSKIDDA DKFIRDNQPI KKEENIVNED 660
661 GPNTSRRTKR PKQIRLLSIA DSSDESSTED SNVFKKDGES IEDGAYGENE DENDSEMQEQ 720
721 LKSMINELIN SKISTFLRDQ MDQFELKINA LLDKILEEKV TRIIEQKLGS HTGKFSTLKR 780
781 PQLYMTEEHN VGFDMEVPKK LRTSGKYAET VKDNDDHQAM STTASPSPEQ DQEAKSYTDE 840
841 QEFMLDKSID SIEGIILEWF TPNAKYANQC VHSMNKSGNK SWRANCEALY KERKSIVEFY 900
901 IYLVNHESLD RYKAVDICEK LRDQNEGSFS RLAKFLRKWR HDHQNSFDGL LVYLSN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.73696253244735 | bayes_pls_golite062009 |
| catalytic activity | 1.16839016519994 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.897470387532799 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.893619260648623 | bayes_pls_golite062009 |
| protein binding | 0.593345606025678 | bayes_pls_golite062009 |
| nucleic acid binding | 0.446493119279535 | bayes_pls_golite062009 |
| DNA binding | 0.398540590517261 | bayes_pls_golite062009 |
|
Region A: Residues: [488-670] |
1 11 21 31 41 51
| | | | | |
1 PIFGNSDFQS YFNDKTIHSK GSPILSFDIL PGFNKIYKNK TNFYSLLIER PSQLTFASSH 60
61 NPDTHPTQKQ ESEGPLQMSQ LDTTQLNELL KQQSFEYVQF QTLSNFQILL SVFNKIFEKL 120
121 EMKKSSRGYI LHQLNLFKIT LDERIKKSKI DDADKFIRDN QPIKKEENIV NEDGPNTSRR 180
181 TKR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [671-825] |
1 11 21 31 41 51
| | | | | |
1 PKQIRLLSIA DSSDESSTED SNVFKKDGES IEDGAYGENE DENDSEMQEQ LKSMINELIN 60
61 SKISTFLRDQ MDQFELKINA LLDKILEEKV TRIIEQKLGS HTGKFSTLKR PQLYMTEEHN 120
121 VGFDMEVPKK LRTSGKYAET VKDNDDHQAM STTAS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [826-956] |
1 11 21 31 41 51
| | | | | |
1 PSPEQDQEAK SYTDEQEFML DKSIDSIEGI ILEWFTPNAK YANQCVHSMN KSGNKSWRAN 60
61 CEALYKERKS IVEFYIYLVN HESLDRYKAV DICEKLRDQN EGSFSRLAKF LRKWRHDHQN 120
121 SFDGLLVYLS N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
