| Protein: | TPO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 614 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPO2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..614] | [1..614] |
|
|
2.0E-99 | [54..610] | [50..610] |
|
|
1.0E-97 | [46..603] | [9..575] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MSDQESVVSF NSQNTSMVDV EGQQPQQYVP SKTNSRANQL KLTKTETVKS LQDLGVTSAA 60
61 PVPDINAPQT AKNNIFPEEY TMETPSGLVP VATLQSMGRT ASALSRTRTK QLNRTATNSS 120
121 STGKEEMEEE ETEEREDQSG ENELDPE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.244 | 0.131 | vacuolar membrane | c.26.1 | Nucleotidylyl transferase |
|
Region A: Residues: [148-347] |
1 11 21 31 41 51
| | | | | |
1 IEFVTFVTGD PENPHNWPSW VRWSYTVLLS ILVICVAYGS ACISGGLGTV EKKYHVGMEA 60
61 AILSCSLMVI GFSLGPLIWS PVSDLYGRRV AYFVSMGLYV IFNIPCALAP NLGCLLACRF 120
121 LCGVWSSSGL CLVGGSIADM FPSETRGKAI AFFAFAPYVG PVVGPLVNGF ISVSTGRMDL 180
181 IFWVNMAFAG VMWIISSAIP
|
|
Region B: Residues: [389-614] |
1 11 21 31 41 51
| | | | | |
1 CLLRPLYFAV TEPVLVATCF YVCLIYSLLY AFFFAFPVIF GELYGYKDNL VGLMFIPIVI 60
61 GALWALATTF YCENKYLQIV KQRKPTPEDR LLGAKIGAPF AAIALWILGA TAYKHIIWVG 120
121 PASAGLAFGF GMVLIYYSLN NYIIDCYVQY ASSALATKVF LRSAGGAAFP LFTIQMYHKL 180
181 NLHWGSWLLA FISTAMIALP FAFSYWGKGL RHKLSKKDYS IDSVEM
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1ja5A_ |
| Description: | No description for 1ja5A_ was found. |
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.24937104052238 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.01584233411372 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [348-388] |
1 11 21 31 41 51
| | | | | |
1 ETYAPVILKR KAARLRKETG NPKIMTEQEA QGVSMSEMMR A
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1ja5A_ |
| Description: | No description for 1ja5A_ was found. |
