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View Structure Prediction Details

Protein: YGR122W
Organism: Saccharomyces cerevisiae
Length: 402 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR122W.

Description E-value Query
Range
Subject
Range
YGR122W - Probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III...
YG34_YEAST - Uncharacterized protein YGR122W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR122W ...
0.0 [1..402] [1..402]

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Predicted Domain #1
Region A:
Residues: [1-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRENAMSTKK LPYKLSGSSK ITTSIPNDLI ILRNNCINSL NSSSSKADSI TCIDTWLKYT  60
   61 EGLLTHRYEA NNDAALIEEE IAIALINVAV FYQDIGIETL YRAYESSQAS NNLWTTSGTY 120
  121 LKRGLGLICF LGKNFQINTA NDCQKMQVLN VLNQLSLEFQ LLQQLGIVVL ALSKLRSKIS 180
  181 KDAVADLEPQ ELEELGKSSV FYAKLCIGSY STASQCQGGR IVDALFMNYL QSLTYLFLSI 240
  241 NQYNNDECGI AIGMLQESIK KLLNIVPNSQ LKELDILSST DITKKRDLIK MSFKRKIHGS 300
  301 TLKNQRIFEK KVPFSSKAYM MPLLKSSLDD FVIPLTILLR YRYQTTNENY SFKTVETDVS 360
  361 KLKELFPRGK SSDIEGTVWS FQDGHLTFAD SNNATHNCGN YF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle