| Protein: | PCP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 346 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCP1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-81 | [1..346] | [1..346] |
|
|
3.0E-50 | [37..341] | [110..404] |
|
|
3.0E-41 | [43..345] | [3..301] |
|
|
3.0E-40 | [59..340] | [97..365] |
|
|
3.0E-37 | [88..338] | [9..278] |
|
|
8.0E-37 | [97..330] | [105..337] |
|
|
1.0E-36 | [146..336] | [169..358] |
|
|
2.0E-35 | [119..339] | [171..374] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MSGVSSVMLG LRPATRIFFR SNISVSPSRT FVSYIGRSQS TSILKNAPNL EDNVTNLQKI 60
61 IPKRFFSQTS ILKSRWKPIF NEETTNRYVR LNRFQQYQQQ RSGG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.432 | a.22.1 | Histone-fold |
| View | Download | 0.432 | a.22.1 | Histone-fold |
| View | Download | 0.283 | a.77.1 | DEATH domain |
| View | Download | 0.283 | a.77.1 | DEATH domain |
| View | Download | 0.649 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.649 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.319 | a.4.12 | TrpR-like |
| View | Download | 0.319 | a.4.12 | TrpR-like |
| View | Download | 0.290 | a.60.8 | HRDC-like |
| View | Download | 0.290 | a.60.8 | HRDC-like |
| View | Download | 0.265 | a.29.2 | Bromodomain |
| View | Download | 0.256 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.229 | a.77.1 | DEATH domain |
| View | Download | 0.224 | a.2.7 | tRNA-binding arm |
| View | Download | 0.219 | a.74.1 | Cyclin-like |
| View | Download | 0.219 | a.77.1 | DEATH domain |
| View | Download | 0.217 | a.29.2 | Bromodomain |
| View | Download | 0.210 | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.201 | a.71.2 | Helical domain of Sec23/24 |
|
Region A: Residues: [105-346] |
1 11 21 31 41 51
| | | | | |
1 NPLGSMTILG LSLMAGIYFG SPYLFEHVPP FTYFKTHPKN LVYALLGINV AVFGLWQLPK 60
61 CWRFLQKYML LQKDYVTSKI SIIGSAFSHQ EFWHLGMNML ALWSFGTSLA TMLGASNFFS 120
121 LYMNSAIAGS LFSLWYPKLA RLAIVGPSLG ASGALFGVLG CFSYLFPHAK ILLFVFPVPG 180
181 GAWVAFLASV AWNAAGCALR WGSFDYAAHL GGSMMGVLYG WYISKAVEKQ RQRRLQAAGR 240
241 WF
|
| Detection Method: | |
| Confidence: | 51.443697 |
| Match: | PF01694 |
| Description: | Rhomboid family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
