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View Structure Prediction Details

Protein: ASK10
Organism: Saccharomyces cerevisiae
Length: 1146 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASK10.

Description E-value Query
Range
Subject
Range
ASK10_YEAST - Activator of SKN7 protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ASK10 PE=1 ...
gi|207345134 - gi|207345134|gb|EDZ72053.1| YGR097Wp-like protein [Saccharomyces cerevisiae AWRI1631]
ASK10 - Component of the RNA polymerase II holoenzyme, phosphorylated in response to oxidative stress; has a...
0.0 [1..1146] [1..1146]
SLM1_SCHPO - Cytoskeletal signaling protein slm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slm1 P...
SPAC637.13c - cytoskeletal signaling protein
0.0 [151..517] [2..337]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDYFSSRPS QTLTPMGNKP SGGGGGDDAS SIHSKSSQYL MDILPDSMTL NESVSSIVAN  60
   61 NQAKEFILPE TDERSPYFIN VPIPKAQPTS TTETKKPLAG DEAIDGQFVK EYPTDILVDR 120
  121 FYKWKKILKG LVIYLREVAY AQEQFARINY QLKGSVKFPF LTDIDETTNT ITDP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTTAPRGPKK AQPAQKKVGL TDSEQFQMQM QQEQQENAVQ APTDESKMSL APHEYKPVQT  60
   61 TESDNTSAAS GFVKFGSGSI QDIQVILKKY HLSLANQQFK ISKEITSTVI PKLEELRKDL 120
  121 RYKITEIKDL HGDFKTNIGA HIQLTSQLLK KYIAAVKFMN AHGIGNDRAS PTNKKPHKLD 180
  181 PKHDPYLLKL QLDLQLKRQV AEETYLQEAF INLQSSGLQL EKIIYTKIQH ALLRYSALID 240
  241 SEARLMIKNM CQELQHGIIS KPPAFEWDNF VTQHPSCLLN WKSND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [460-758]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIPPPRKVSD VIYPHMKSPL AKCIKAGYFL KKSELLPTYH QGYFVLTSNY IHEFQSSDFY  60
   61 NLSSSTPNST KSSAYSSSVS IADTYANANN AKANNHHRQA SDVHNSSTTT GGTAGANGIR 120
  121 GIRKKSYLAP IMSIPLNDCT LKDASSTKFV LVGKPTLNEN ADVRKSSSST YLSGSSQASL 180
  181 PKYGHETAKI FSKAPFHKFL KGSKPKNKNT KSSELDQFYA AAQKESNNYV TWTFKIVSPE 240
  241 PSEEELKHFK RWVQDLKNLT SFNDTKDRIK FIEDRVMKSH RFKAGHMSRN SVNIGSHTP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.886057
Match: PF00169
Description: PH domain

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [759-1146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CLTDSTFTLQ DGTTTSVNLK GRAEKPQYIH IQNNSLADFD GNGFRSKVNT PAIDDYGNLI  60
   61 TVERRPAQSP HQYSDYMATS GNTTPSYSSG SRPQSMYNGY NPAVSITSNG MMLQQSTANN 120
  121 NTNPTTNLRH QRNISQTSSL PGFSYTSLSL PVNSPGSSNS ESSSGGYFAI PLHGNNNNNN 180
  181 YTQRNSEGSS PCYNDDQIRQ QQQPLQMQPL SRTSSSSVNV TAMRSTSAGN SITANAPVVP 240
  241 KVMVNNQNVK TVAADQSATA PSSPTMNSSV TTINRESPYQ TLKKTNSTGN VPCLTAEKTH 300
  301 AHPAFYKRGN NSAQNLTTSS STASRVHPIR KHKKNVSFSS LNSLMFSKKG ANHGGNLMTN 360
  361 QFMSGGIQED DGDSTNNDTI KLNQSIYS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle