| Protein: | DBF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 572 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBF2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..572] | [1..572] |
|
|
0.0 | [62..553] | [14..494] |
|
|
0.0 | [64..553] | [2..491] |
|
|
0.0 | [64..553] | [2..485] |
|
|
0.0 | [75..553] | [38..506] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MLSKSEKNVD LLAGNMSNLS FDGHGTPGGT GLFPNQNITK RRTRPAGIND SPSPVKPSFF 60
61 PYEDTSNMDI DEVSQPDMDV SNSPKKLPPK FYERA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [96-172] |
1 11 21 31 41 51
| | | | | |
1 TSNKTQRVVS VCKMYFLEHY CDMFDYVISR RQRTKQVLEY LQQQSQLPNS DQIKLNEEWS 60
61 SYLQREHQVL RKRRLKP
|
|
Region B: Residues: [221-240] |
1 11 21 31 41 51
| | | | | |
1 HVLTERDILT TTRSEWLVKL
|
|
Region C: Residues: [256-505] |
1 11 21 31 41 51
| | | | | |
1 FVPGGDFRTL LINTRCLKSG HARFYISEMF CAVNALHDLG YTHRDLKPEN FLIDAKGHIK 60
61 LTDFGLAAGT ISNERIESMK IRLEKIKDLE FPAFTEKSIE DRRKMYNQLR EKEINYANSM 120
121 VGSPDYMALE VLEGKKYDFT VDYWSLGCML FESLVGYTPF SGSSTNETYD NLRRWKQTLR 180
181 RPRQSDGRAA FSDRTWDLIT RLIADPINRL RSFEHVKRMS YFADINFSTL RSMIPPFTPQ 240
241 LDSETDAGYF
|
| Detection Method: | |
| Confidence: | 513.0 |
| Match: | 1ctpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [173-220] |
1 11 21 31 41 51
| | | | | |
1 KNRDFEMITQ VGQGGYGQVY LARKKDTKEV CALKILNKKL LFKLNETK
|
|
Region B: Residues: [241-255] |
1 11 21 31 41 51
| | | | | |
1 LYAFQDLQSL YLAME
|
|
Region C: Residues: [506-572] |
1 11 21 31 41 51
| | | | | |
1 DDFTSEADMA KYADVFKRQD KLTAMVDDSA VSSKLVGFTF RHRNGKQGSS GILFNGLEHS 60
61 DPFSTFY
|
| Detection Method: | |
| Confidence: | 513.0 |
| Match: | 1ctpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
| Matching Structure (courtesy of the PDB): |
|
