| Protein: | SPR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 512 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPR3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..512] | [1..512] |
|
|
8.0E-99 | [15..427] | [33..476] |
|
|
8.0E-97 | [14..429] | [32..478] |
|
|
7.0E-87 | [39..436] | [59..484] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MKSKGSRLST DCPVEFPKIV SGFAEEVKIR RQSSQGQYAV DSHPPKSPEL KHRRQRSSSF 60
61 VNGKCRNRDL PLLDNKKAQE I
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-184] |
1 11 21 31 41 51
| | | | | |
1 NTNSHGQDIG IKNLPRQREL LNAKNGIDFT LMVAGQSGLG KTTFINSLFS TSLIDDDIKE 60
61 NKPIIRYKSI VEGDGTHLNF NVIDTPGFGN NMDNAFTWRT MVN
|
| Detection Method: | |
| Confidence: | 11.76 |
| Match: | 1h65A |
| Description: | Chloroplast protein translocon GTPase Toc34 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [185-512] |
1 11 21 31 41 51
| | | | | |
1 YIDEEIRSYI FQEEQPDRTK MVDNRVHCCL YFLRPSNKGI DTLDVVTMKK LAKRVNLIPV 60
61 IAKSDLLTKE ELKNFKTQVR EIIRVQDIPV CFFFGDEVLN ATQDIFQKYP FSIIASNEYI 120
121 FNEKGEKVKG RQYKWGAVDI ENEKYCDFKI LQKTIFDWNL IDLVESTEDY YEKCRSEMLR 180
181 TRLLKARDCL TTKSVDITEE QRKFLEEEMN FDEIEENKLK NYKCYEIINK TVMDKVATEW 240
241 DPEFITRQLE AKKKFNELSN REISKFRDWK KSLFMEQENF NQEIEQLNHK LENLQLECQD 300
301 LEYKLLIGKS SNSHSTDSAT LVNVHIKR
|
| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
