| Protein: | SPR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 512 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPR3.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..512] | [1..512] |
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8.0E-99 | [15..427] | [33..476] |
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8.0E-97 | [14..429] | [32..478] |
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7.0E-87 | [39..436] | [59..484] |
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Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MKSKGSRLST DCPVEFPKIV SGFAEEVKIR RQSSQGQYAV DSHPPKSPEL KHRRQRSSSF 60
61 VNGKCRNRDL PLLDNKKAQE I
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.767 | 0.345 | cell morphogenesis involved in conjugation with cellular fusion | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.575 | 0.098 | cell morphogenesis involved in conjugation with cellular fusion | d.58.5 | GlnB-like |
| View | Download | 0.515 | 0.050 | cell morphogenesis involved in conjugation with cellular fusion | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.508 | 0.005 | cell morphogenesis involved in conjugation with cellular fusion | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.767 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.609 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.609 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.575 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.515 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.508 | N/A | N/A | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.457 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.441 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.428 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.417 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.386 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.371 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.364 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.364 | N/A | N/A | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.357 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.349 | N/A | N/A | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.337 | N/A | N/A | d.58.12 | eEF-1beta-like |
| View | Download | 0.328 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.325 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.324 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.324 | N/A | N/A | d.58.12 | eEF-1beta-like |
| View | Download | 0.323 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.323 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.323 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.319 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.315 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.310 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.304 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.301 | N/A | N/A | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.296 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.290 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.288 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.288 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.276 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.274 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.271 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.270 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.267 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.266 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.263 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.257 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.251 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.251 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.249 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.237 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.237 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.236 | N/A | N/A | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.233 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.226 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.221 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.221 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.220 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.219 | N/A | N/A | d.94.1 | HPr-like |
| View | Download | 0.218 | N/A | N/A | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.218 | N/A | N/A | d.58.5 | GlnB-like |
| View | Download | 0.214 | N/A | N/A | d.58.9 | RuBisCO, large subunit, small (N-terminal) domain |
| View | Download | 0.214 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.213 | N/A | N/A | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.207 | N/A | N/A | d.58.10 | Acylphosphatase-like |
| View | Download | 0.203 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.202 | N/A | N/A | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.201 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.201 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
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Region A: Residues: [82-184] |
1 11 21 31 41 51
| | | | | |
1 NTNSHGQDIG IKNLPRQREL LNAKNGIDFT LMVAGQSGLG KTTFINSLFS TSLIDDDIKE 60
61 NKPIIRYKSI VEGDGTHLNF NVIDTPGFGN NMDNAFTWRT MVN
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| Detection Method: | |
| Confidence: | 11.76 |
| Match: | 1h65A |
| Description: | Chloroplast protein translocon GTPase Toc34 |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [185-512] |
1 11 21 31 41 51
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1 YIDEEIRSYI FQEEQPDRTK MVDNRVHCCL YFLRPSNKGI DTLDVVTMKK LAKRVNLIPV 60
61 IAKSDLLTKE ELKNFKTQVR EIIRVQDIPV CFFFGDEVLN ATQDIFQKYP FSIIASNEYI 120
121 FNEKGEKVKG RQYKWGAVDI ENEKYCDFKI LQKTIFDWNL IDLVESTEDY YEKCRSEMLR 180
181 TRLLKARDCL TTKSVDITEE QRKFLEEEMN FDEIEENKLK NYKCYEIINK TVMDKVATEW 240
241 DPEFITRQLE AKKKFNELSN REISKFRDWK KSLFMEQENF NQEIEQLNHK LENLQLECQD 300
301 LEYKLLIGKS SNSHSTDSAT LVNVHIKR
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| Detection Method: | |
| Confidence: | 23.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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