| Protein: | GSC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1895 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSC2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..1893] | [35..1943] |
|
|
0.0 | [1..1895] | [1..1895] |
|
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0.0 | [1..1874] | [1..1943] |
|
|
0.0 | [3..1876] | [6..1864] |
|
|
0.0 | [6..1876] | [5..1880] |
|
|
0.0 | [1..1892] | [1..1877] |
|
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0.0 | [1..1878] | [1..1885] |
|
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0.0 | [1..1877] | [1..1883] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MSYNDPNLNG QYYSNGDGTG DGNYPTYQVT QDQSAYDEYG QPIYTQNQLD DGYYDPNEQY 60
61 VDGTQFPQGQ DPSQDQGPYN NDASYYNQPP NMMNPSSQDG ENFSDFSSYG PPSGTYPNDQ 120
121 YTPSQMSYPD QDGSSGASTP YGNGVVNGNG QYYDPNAIEM ALPNDPYPAW TADPQSPLPI 180
181 EQIEDIFIDL TNKFGFQRDS MRNMFDHFMT LLDSRSSRMS PEQALLSLHA DYI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [234-540] |
1 11 21 31 41 51
| | | | | |
1 GGDTANYKKW YFAAQLDMDD EIGFRNMKLG KLSRKARKAK KKNKKAMQEA SPEDTEETLN 60
61 QIEGDNSLEA ADFRWKSKMN QLSPFEMVRQ IALFLLCWGE ANQVRFTPEC LCFIYKCASD 120
121 YLDSAQCQQR PDPLPEGDFL NRVITPLYRF IRSQVYEIVD GRYVKSEKDH NKVIGYDDVN 180
181 QLFWYPEGIA KIVMEDGTRL IDLPAEERYL KLGEIPWDDV FFKTYKETRS WLHLVTNFNR 240
241 IWIMHISVYW MYCAYNAPTF YTHNYQQLVD NQPLAAYKWA TAALGGTVAS LIQVAATLCE 300
301 WSFVPRK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [541-821] |
1 11 21 31 41 51
| | | | | |
1 WAGAQHLSRR FWFLCVIMGI NLGPVIFVFA YDKDTVYSTA AHVVGAVMFF VAVATLVFFS 60
61 VMPLGGLFTS YMKKSTRSYV ASQTFTASFA PLHGLDRWMS YLVWVTVFAA KYAESYFFLI 120
121 LSLRDPIRIL STTSMRCTGE YWWGNKICKV QPKIVLGLMI ATDFILFFLD TYLWYIVVNT 180
181 VFSVGKSFYL GISILTPWRN IFTRLPKRIY SKILATTDME IKYKPKVLIS QIWNAIIISM 240
241 YREHLLAIDH VQKLLYHQVP SEIEGKRTLR APTFFVSQDD N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [822-1685] |
1 11 21 31 41 51
| | | | | |
1 NFETEFFPRD SEAERRISFF AQSLSTPIPE PLPVDNMPTF TVLTPHYAER ILLSLREIIR 60
61 EDDQFSRVTL LEYLKQLHPV EWDCFVKDTK ILAEETAAYE NNEDEPEKED ALKSQIDDLP 120
121 FYCIGFKSAA PEYTLRTRIW ASLRSQTLYR TISGFMNYSR AIKLLYRVEN PEIVQMFGGN 180
181 ADGLERELEK MARRKFKFLV SMQRLAKFKP HELENAEFLL RAYPDLQIAY LDEEPPLNEG 240
241 EEPRIYSALI DGHCEILENG RRRPKFRVQL SGNPILGDGK SDNQNHALIF YRGEYIQLID 300
301 ANQDNYLEEC LKIRSVLAEF EELGIEQIHP YTPGLKYEDQ STNHPVAIVG AREYIFSENS 360
361 GVLGDVAAGK EQTFGTLFAR TLAQIGGKLH YGHPDFINAT FMTTRGGVSK AQKGLHLNED 420
421 IYAGMNAVLR GGRIKHCEYY QCGKGRDLGF GTILNFTTKI GAGMGEQMLS REYYYLGTQL 480
481 PIDRFLTFYY AHPGFHLNNL FIQLSLQMFM LTLVNLHALA HESILCVYDR DKPITDVLYP 540
541 IGCYNFHPAI DWVRRYTLSI FIVFWIAFVP IVVQELIERG LWKATQRFFR HILSLSPMFE 600
601 VFAGQIYSSA LLSDIAVGGA RYISTGRGFA TSRIPFSILY SRFAGSAIYM GSRSMLMLLF 660
661 GTVAHWQAPL LWFWASLSAL IFAPFIFNPH QFAWEDFFLD YRDYIRWLSR GNNKYHRNSW 720
721 IGYVRMSRSR VTGFKRKLVG DESEKSAGDA SRAHRTNLIM AEIIPCAIYA AGCFIAFTFI 780
781 NAQTGVKTTD EDRVNSTLRI IICTLAPIVI DIGVLFFCMG LSCCSGPLLG MCCKKTGSVM 840
841 AGIAHGIAVV VHIVFFIVMW VLEG
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | PF02364 |
| Description: | 1,3-beta-glucan synthase component |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1686-1895] |
1 11 21 31 41 51
| | | | | |
1 FSFVRMLIGV VTCIQCQRLI FHCMTVLLLT REFKNDHANT AFWTGKWYST GLGYMAWTQP 60
61 TRELTAKVIE LSEFAADFVL GHVILIFQLP VICIPKIDKF HSIMLFWLKP SRQIRPPIYS 120
121 LKQARLRKRM VRRYCSLYFL VLIIFAGCIV GPAVASAHVP KDLGSGLTGT FHNLVQPRNV 180
181 SNNDTGSQMS TYKSHYYTHT PSLKTWSTIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [870-961] |
1 11 21 31 41 51
| | | | | |
1 ERILLSLREI IREDDQFSRV TLLEYLKQLH PVEWDCFVKD TKILAEETAA YENNEDEPEK 60
61 EDALKSQIDD LPFYCIGFKS AAPEYTLRTR IW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [962-1123] |
1 11 21 31 41 51
| | | | | |
1 ASLRSQTLYR TISGFMNYSR AIKLLYRVEN PEIVQMFGGN ADGLERELEK MARRKFKFLV 60
61 SMQRLAKFKP HELENAEFLL RAYPDLQIAY LDEEPPLNEG EEPRIYSALI DGHCEILENG 120
121 RRRPKFRVQL SGNPILGDGK SDNQNHALIF YRGEYIQLID AN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1124-1256] |
1 11 21 31 41 51
| | | | | |
1 QDNYLEECLK IRSVLAEFEE LGIEQIHPYT PGLKYEDQST NHPVAIVGAR EYIFSENSGV 60
61 LGDVAAGKEQ TFGTLFARTL AQIGGKLHYG HPDFINATFM TTRGGVSKAQ KGLHLNEDIY 120
121 AGMNAVLRGG RIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1257-1446] |
1 11 21 31 41 51
| | | | | |
1 HCEYYQCGKG RDLGFGTILN FTTKIGAGMG EQMLSREYYY LGTQLPIDRF LTFYYAHPGF 60
61 HLNNLFIQLS LQMFMLTLVN LHALAHESIL CVYDRDKPIT DVLYPIGCYN FHPAIDWVRR 120
121 YTLSIFIVFW IAFVPIVVQE LIERGLWKAT QRFFRHILSL SPMFEVFAGQ IYSSALLSDI 180
181 AVGGARYIST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1447-1685] |
1 11 21 31 41 51
| | | | | |
1 GRGFATSRIP FSILYSRFAG SAIYMGSRSM LMLLFGTVAH WQAPLLWFWA SLSALIFAPF 60
61 IFNPHQFAWE DFFLDYRDYI RWLSRGNNKY HRNSWIGYVR MSRSRVTGFK RKLVGDESEK 120
121 SAGDASRAHR TNLIMAEIIP CAIYAAGCFI AFTFINAQTG VKTTDEDRVN STLRIIICTL 180
181 APIVIDIGVL FFCMGLSCCS GPLLGMCCKK TGSVMAGIAH GIAVVVHIVF FIVMWVLEG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1686-1895] |
1 11 21 31 41 51
| | | | | |
1 FSFVRMLIGV VTCIQCQRLI FHCMTVLLLT REFKNDHANT AFWTGKWYST GLGYMAWTQP 60
61 TRELTAKVIE LSEFAADFVL GHVILIFQLP VICIPKIDKF HSIMLFWLKP SRQIRPPIYS 120
121 LKQARLRKRM VRRYCSLYFL VLIIFAGCIV GPAVASAHVP KDLGSGLTGT FHNLVQPRNV 180
181 SNNDTGSQMS TYKSHYYTHT PSLKTWSTIK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
