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View Structure Prediction Details

Protein: ERV1
Organism: Saccharomyces cerevisiae
Length: 189 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERV1.

Description E-value Query
Range
Subject
Range
GFER - growth factor, augmenter of liver regeneration
229.0 [0..8] [189..57]
gi|109127227 - gi|109127227|ref|XP_001082639.1| PREDICTED: similar to erv1-like growth factor isoform 2 [Macaca mul...
221.0 [0..8] [189..57]
gi|73959530 - gi|73959530|ref|XP_537010.2| PREDICTED: similar to erv1-like growth factor [Canis familiaris]
215.0 [0..12] [189..166]
ALR_MOUSE - FAD-linked sulfhydryl oxidase ALR OS=Mus musculus GN=Gfer PE=1 SV=2
212.0 [0..28] [189..62]
erv1 - sulfhydryl oxidase
ERV1_SCHPO - Mitochondrial FAD-linked sulfhydryl oxidase erv1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...
208.0 [0..21] [182..14]
gi|49525710 - gi|49525710|emb|CAG59329.1| unnamed protein product [Candida glabrata]
gi|50287947, gi|... - gi|50287947|ref|XP_446402.1| unnamed protein product [Candida glabrata], gi|49525710|emb|CAG59329.1|...
206.0 [0..12] [189..3]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIDKMTDN PPQEGLSGRK IIYDEDGKPC RSCNTLLDFQ YVTGKISNGL KNLSSNGKLA  60
   61 GTGALTGEAS EL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGSRTYRKV DPPDVEQLGR SSWTLLHSVA ASYPAQPTDQ QKGEMKQFLN IFSHIYPCNW  60
   61 CAKDFEKYIR ENAPQVESRE ELGRWMCEAH NKVNKKLRKP KFDCNFWEKR WKDGWDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.39794
Match: 1oqcA
Description: Augmenter of liver regeneration
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle